| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 235,410 | A→C | 5.4% | intergenic (+107/+18) | PP_0183 → / ← argH | glutathione S‑transferase/argininosuccinate lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 235,410 | 0 | A | C | 5.4% | 208.0 / 2.0 | 70 | intergenic (+107/+18) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base A (36/30); new base C (2/2); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01 | |||||||||||
CGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTGCTCG > NC_002947/235266‑235557 | cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGccc > 4:255939/1‑149 (MQ=255) gCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑c < 6:167915/149‑1 (MQ=255) gCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑c > 2:157818/1‑149 (MQ=255) ccTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑Cg > 1:288518/1‑149 (MQ=255) ttCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCACACAGGTCTGCACCGGTTTTGAAACTTGTGCATTTCCTGGGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGcacgagac > 4:192765/1‑142 (MQ=38) aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCtt < 2:257674/148‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTgg < 8:187727/149‑1 (MQ=255) tgatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGAt > 5:20777/1‑148 (MQ=255) atCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAg > 6:206196/1‑149 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGCGGGCGAAGCCCT‑CGCCATGGGGGATTAGc > 2:354028/1‑146 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGc > 3:319704/1‑146 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGc > 3:150834/1‑146 (MQ=255) ggCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGc > 4:121831/1‑148 (MQ=255) cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGc < 3:255939/149‑1 (MQ=255) aGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc < 5:206196/147‑1 (MQ=255) tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCAGCAACGTTTTTGAAACTTGTGCATTACCTGAGGGAGAGGGGGTGCCCGCGAACGACGGCGAAGCCCA‑CGCCATGCGGGATTAGCGAGACGCCAACAGGGCCTTGc > 6:236102/1‑149 (MQ=38) ggtggtGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCac < 8:272608/149‑1 (MQ=255) gtgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTTCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCac < 8:277666/148‑1 (MQ=255) tgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGGTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCccg > 1:284806/1‑148 (MQ=255) aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAa‑cgac > 5:307182/1‑149 (MQ=255) gCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAa‑cgacg > 6:98372/1‑149 (MQ=255) cccTTCGCGGGCATGCCCGCTCCCACAGGTCTGCTCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGCACGCGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACgg > 3:74782/1‑149 (MQ=255) cccTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACgg < 3:252040/149‑1 (MQ=255) cccTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACgg > 5:327245/1‑149 (MQ=255) cccTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACgg > 4:252040/1‑149 (MQ=255) tgggagcgGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGgc > 1:158237/6‑149 (MQ=255) cTTCGCGGGCTTGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGGGGGCGTGCCCGCGAACGAGGGCGAAGCGCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGgca < 1:354028/149‑1 (MQ=255) ttCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGgcag > 6:357483/1‑149 (MQ=255) gcgGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGgcagca < 4:150834/148‑1 (MQ=255) ccACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTgcgccggcgc > 5:166331/1‑149 (MQ=255) ccACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTgcgccggc < 1:157818/147‑1 (MQ=255) ccACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACACCAACAgg < 8:153532/108‑1 (MQ=255) ccACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACACCAACAgg > 7:153532/1‑108 (MQ=255) ggTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTac < 1:284813/149‑1 (MQ=255) ctccACCTTTTTTGAAACTTGTGCATACCCTGTGGTCGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTaccac < 3:192765/146‑1 (MQ=255) gCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAgcacgcac > 7:179256/1‑127 (MQ=255) gCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAgcacgcac < 8:179256/127‑1 (MQ=255) cACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTGAGCATTGGGGGATTAGCGAGACCCCAACAGGGCATTGCCAAGAA‑CGCCGGCAGCCCGCACATGGGCCGGCCCCGTacccca > 1:295599/1‑145 (MQ=255) aCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAt > 1:343277/1‑149 (MQ=255) aCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCAACAAt > 5:331497/1‑149 (MQ=255) cGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgt < 5:99849/149‑1 (MQ=255) gTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg < 3:121831/149‑1 (MQ=255) tttttGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTgg > 8:3569/1‑149 (MQ=255) aaaCTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCAcgc < 4:319704/149‑1 (MQ=255) cTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCa < 5:357483/149‑1 (MQ=255) cTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCa < 2:158237/149‑1 (MQ=255) gggAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCAcc < 5:212929/139‑1 (MQ=255) gggAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCAcc > 6:212929/1‑139 (MQ=255) gtaGCGGGGTTGCCCGCGAACGAGTGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTTCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCa < 5:236102/146‑1 (MQ=255) aGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCg > 5:285749/1‑149 (MQ=255) gCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGt < 6:327245/149‑1 (MQ=255) ggCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAg > 8:208096/1‑149 (MQ=255) gCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCat > 5:155317/1‑147 (MQ=255) gTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATATGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCAc > 6:185269/1‑149 (MQ=255) cccGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACgg < 6:285749/148‑1 (MQ=255) cgcgAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCa > 6:123927/1‑148 (MQ=255) ccaaggcGAGGGCTTCGCCCT‑CGTCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCa > 4:300019/7‑148 (MQ=255) caaggcGAGGGCTTCGCCCT‑CGTCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg > 6:182436/6‑107 (MQ=255) caaggcGAGGGCTTCGCCCT‑CGTCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg < 5:182436/102‑1 (MQ=255) cgAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCaaa > 2:10600/1‑148 (MQ=255) aaCGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAacac < 2:343277/149‑1 (MQ=255) gAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTc < 6:166331/149‑1 (MQ=255) gAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTc < 5:98372/149‑1 (MQ=255) gggCTACGCCCG‑CGCCTTGGGGGATACGC‑CCTCGCCCACCCGGCCCTTCCACCCACCGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTc < 2:284806/147‑1 (MQ=255) gggCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCt > 2:41171/1‑149 (MQ=255) gcgCGAAGCCCT‑CGCCTTCGCGGATTAGCGAGACGCCAACAGCGCCTTGCCACGAA‑CGACCGCAGCACGCACCTGCGCCCGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACAcctcct > 6:202666/3‑149 (MQ=255) ggCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTg < 3:330385/149‑1 (MQ=255) ggCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATATGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTg < 5:185269/149‑1 (MQ=255) gAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTc > 7:146715/1‑143 (MQ=255) gAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTc < 8:146715/143‑1 (MQ=255) aaGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTGCTCg < 6:20777/149‑1 (MQ=255) aGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTGCTc > 6:370511/1‑147 (MQ=255) | CGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCT‑CGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAA‑CGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAACACGTCCTGCTCG > NC_002947/235266‑235557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |