| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,212,276 | T→C | 6.7% | *189W (TGA→TGG) ‡ | PP_2816 ← | transcriptional regulator NfxB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,212,276 | 0 | T | C | 6.7% | 218.7 / 4.7 | 74 | *189W (TGA→TGG) ‡ | PP_2816 | transcriptional regulator NfxB |
| Reads supporting (aligned to +/- strand): ref base T (38/31); new base C (3/2); total (41/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
ATCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACAT > NC_002947/3212131‑3212424 | aTCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCaa > 2:261769/1‑149 (MQ=255) cTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAgg > 5:295555/1‑147 (MQ=255) cTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAgg < 6:295555/147‑1 (MQ=255) cGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCcg > 3:103601/1‑149 (MQ=255) cATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTg > 3:341437/1‑149 (MQ=255) cATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTg < 7:35697/149‑1 (MQ=255) aTCGCATCCACATCGCCGCTGCCCTTGAGCTGGGGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCCTCCTTTGACCCCTATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCCCTATTGAGCGCCcgc‑gca < 1:281330/149‑3 (MQ=255) tCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTgg > 2:2918/1‑148 (MQ=255) gCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCa < 5:359173/148‑1 (MQ=255) tCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGc > 4:123910/1‑149 (MQ=255) cAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGAAGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGccc > 7:13983/1‑149 (MQ=255) aGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCt < 7:265356/149‑1 (MQ=255) tCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTa < 4:278320/149‑1 (MQ=255) tCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTa < 1:2918/149‑1 (MQ=255) ccgcTGCCCTTGAGCTGGAGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGa > 6:228069/1‑148 (MQ=255) cgcTGCCCTTGAGCTGGTGATCTGGAGCACGCCTCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTc < 8:140405/115‑1 (MQ=255) cgcTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTc > 7:140405/1‑115 (MQ=255) cgcTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTc < 8:145428/115‑1 (MQ=255) cgcTGCCCTTGAGCTGGTGATCTGGAGCACGCCCCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTc > 7:145428/1‑115 (MQ=255) gcTGCCCTTGAGCTGGTGAGCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAAc < 2:243438/149‑1 (MQ=255) ttGAGCTGCTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGctct > 5:300855/1‑149 (MQ=255) aGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCa > 8:331772/1‑149 (MQ=255) tGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCa > 3:1849/1‑149 (MQ=255) gTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCAcc > 4:302993/1‑149 (MQ=255) gTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGAAATGCCGTGTTGAAACGCGCTCTCCAGGAcc > 1:217111/1‑149 (MQ=255) tGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTACGCGGGCGCCCTATTGAGCGccc > 6:13735/1‑110 (MQ=255) tGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTACGCGGGCGCCCTATTGAGCGccc < 5:13735/110‑1 (MQ=255) tCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTATGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTCGCAATGACCTGTAGAAACGCGCTCTCCAGCACCGTTg > 7:167264/1‑149 (MQ=255) gAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGcaca > 8:8914/1‑149 (MQ=255) gccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACActctct > 1:130691/1‑149 (MQ=255) gccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACActctct < 7:8914/149‑1 (MQ=255) ccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCtt < 4:1849/149‑1 (MQ=255) cgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg > 3:49426/1‑149 (MQ=255) gATGACGGCGAGCAATAGCGTTCTTTCACTTCCTTTGA‑CGCAATATGTATTGACGGCTGTTGCCCTGGGGGGGCGCTCAATAGGGCTCCCGC‑GTTGCAATGGCCTGTAGAAACGCGCTCTCCTGCACGGTTGCACACTCTCTTGgcgc < 8:167264/148‑1 (MQ=255) gATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGgcgc < 3:302993/148‑1 (MQ=255) aTGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGgcgcgc > 4:262770/1‑149 (MQ=255) aTGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGgcgcgc > 2:24663/1‑149 (MQ=255) gCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGcccc > 6:275842/1‑149 (MQ=255) gCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGcccc > 8:284736/1‑149 (MQ=255) cGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGgcgc > 4:284085/1‑80 (MQ=255) aGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGtt < 4:292846/149‑1 (MQ=255) aaTAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg < 2:280673/131‑1 (MQ=255) aaTAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg > 1:280673/1‑131 (MQ=255) tAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcgg < 4:341437/149‑1 (MQ=255) gCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTGACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcggg < 6:300855/148‑1 (MQ=255) gCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGACTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCAcc < 1:1626/111‑1 (MQ=255) gCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGACTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCAcc > 2:1626/1‑111 (MQ=255) ttCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTc < 2:130691/149‑1 (MQ=255) cttccttTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgc > 1:369459/1‑149 (MQ=255) cttccttTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgc < 4:49426/149‑1 (MQ=255) ttccttTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg > 4:20667/1‑115 (MQ=255) ttccttTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgc > 2:193916/1‑148 (MQ=255) ccttTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgcca < 5:228069/148‑1 (MQ=255) gCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGc < 8:13983/149‑1 (MQ=255) gCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGc < 7:331772/149‑1 (MQ=255) cAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCg < 5:275842/149‑1 (MQ=255) aaTAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGa > 3:123652/1‑149 (MQ=255) gTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACa < 4:34858/140‑1 (MQ=255) gTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACa > 3:34858/1‑140 (MQ=255) gTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACg > 4:113884/1‑148 (MQ=255) ttCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACa > 2:301285/1‑149 (MQ=255) ggCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCg < 3:262770/149‑1 (MQ=255) cTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAAc > 7:152028/1‑57 (MQ=255) cTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAAc < 8:152028/57‑1 (MQ=255) cTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGt > 5:34760/1‑149 (MQ=255) ttGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCa < 3:123910/148‑1 (MQ=255) ttGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCa < 1:261769/148‑1 (MQ=255) cTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAAcg > 4:140665/1‑149 (MQ=255) cTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACGCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAAc > 4:256558/1‑121 (MQ=255) cTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACCCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAAc < 3:256558/121‑1 (MQ=255) cacgcgGGCGCCCTATTGAGCGCCCGCGGCGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAAcg > 1:22374/3‑149 (MQ=255) cacgcgGGCGCCCTATTGAGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAAcgc > 5:11351/3‑149 (MQ=255) cgcgGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAAcgc < 7:284736/147‑1 (MQ=255) gcTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGa > 7:91256/1‑148 (MQ=255) tCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACAt > 7:243745/1‑149 (MQ=255) tCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACAt > 6:79710/1‑149 (MQ=255) | ATCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGA‑CGCAATAGGTCTTCACGGCTGTTGCCCTGCGCGGGCGCTCAATAGGGCGCCCGC‑GTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGACAT > NC_002947/3212131‑3212424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |