| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,330,900 | G→T | 6.0% | intergenic (‑29/+4) | PP_2928 ← / ← nspC | saccharopine dehydrogenase/carboxynorspermidine/carboxyspermidine decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,330,900 | 0 | G | T | 6.0% | 237.0 / 3.8 | 76 | intergenic (‑29/+4) | PP_2928/nspC | saccharopine dehydrogenase/carboxynorspermidine/carboxyspermidine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base G (39/32); new base T (2/3); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.30e-01 | |||||||||||
TTTGGAGATGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCGTGTCGAT > NC_002947/3330752‑3331047 | tttGGAGATGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCg < 7:79746/149‑1 (MQ=255)tttGGAGATGTTCCGTGACGCGATGGCGATACGACCCACTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCg < 2:117929/149‑1 (MQ=255) gagaTGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGGTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCt > 2:293316/1‑149 (MQ=255) agaTGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCt > 4:271317/1‑148 (MQ=255) gaTGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTa > 5:210969/1‑149 (MQ=255) gaTGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTa < 4:219799/149‑1 (MQ=255) aTGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTAc < 3:271317/149‑1 (MQ=255) tGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTAc < 8:267588/148‑1 (MQ=255) ttCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGa < 6:210969/148‑1 (MQ=255) cGTGAAGCGATGGCTATACGATCCTGTTCGTCTTTATGCTTAGCGCACTTGTGGGCAACCACCTTGGCGACACATCCTGCAACAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTTAAAGCCGGTATTACGACAgg < 4:159022/149‑1 (MQ=255) gTGACGCGATGGCGATACGACCCAGATCGTCCTTATGCTGCGCGCACTTGTGGGCCACCACCTTGTCGACACCTCCTGCACCAATGATAAGAACGATCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTATTACGACAGGc > 6:289721/1‑149 (MQ=255) tGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCt > 3:45064/1‑149 (MQ=255) cgcgATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCTGTCGTAAGACCGGCtttc < 8:111812/149‑4 (MQ=255) gATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAAc < 1:22506/149‑1 (MQ=255) gATGGCGATACGACCCAGCTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAAc < 6:348946/149‑1 (MQ=255) gCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTa < 4:314830/148‑1 (MQ=255) gCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTa < 5:68500/148‑1 (MQ=255) gATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCTGTCGTAAGACCGGCtttc > 4:340682/1‑137 (MQ=255) gATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCTGTCGTAAGACCGGCtttc < 3:340682/140‑4 (MQ=255) gATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTc > 1:183691/1‑149 (MQ=255) gACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGTGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCg > 5:357349/1‑148 (MQ=255) ccAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAAc > 8:85554/1‑149 (MQ=255) ttCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGaa > 1:217046/1‑149 (MQ=255) cgtcgtTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACt > 6:8557/1‑149 (MQ=255) cgtcgtTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACt > 2:111284/1‑149 (MQ=255) tcgtTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTcg > 8:73717/1‑149 (MQ=255) cgcACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGa > 2:130760/1‑149 (MQ=255) tgGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCg > 7:48828/1‑149 (MQ=255) ggCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCTGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCTCGTACGACTTCGACGCTGCCGTc < 8:22914/149‑1 (MQ=255) ggCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTc > 6:327498/1‑149 (MQ=255) gCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCg < 2:183691/149‑1 (MQ=255) ccaccaCCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTc > 7:286210/1‑147 (MQ=255) caccacCTTGGCGACACCTCCTGCACTAATGATAAGAACGTTCTTCTTCAATTTACCATTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAg > 1:284872/1‑149 (MQ=255) accaccTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTc > 4:1514/1‑145 (MQ=255) caccTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAgctg > 8:21861/1‑149 (MQ=255) cTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCtt > 1:247488/1‑149 (MQ=255) ttGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAg > 3:166889/1‑142 (MQ=255) ttGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAg < 4:166889/142‑1 (MQ=255) ggCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTg < 1:130760/147‑1 (MQ=255) tcctGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATgg > 3:366827/1‑148 (MQ=255) ctGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGaa < 7:73717/148‑1 (MQ=255) ctGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGaa < 2:332120/148‑1 (MQ=255) ctGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAg < 6:357349/149‑1 (MQ=255) aCCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCAt < 5:8557/149‑1 (MQ=255) cAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGAACACGATGGAAGGCATCt > 7:125865/1‑149 (MQ=255) aaTGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCtt < 5:327498/149‑1 (MQ=255) aCGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGtt > 1:15067/1‑148 (MQ=255) ttcttcttcAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAAc > 4:322174/1‑149 (MQ=255) cttcAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCa < 8:286210/146‑1 (MQ=255) cttcAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGtt > 1:102361/1‑149 (MQ=255) cAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGtttt < 1:293316/148‑1 (MQ=255) aTTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCt < 3:1514/149‑1 (MQ=255) tttACCGTTTGCTCCTTACTTGATAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGTCGACTTCGACGCTGGCGTCGAGCTGCTTGACGACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCtt < 5:289721/149‑1 (MQ=255) cccTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGAcc < 2:217046/149‑1 (MQ=255) cTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCAt < 2:102361/149‑1 (MQ=255) cTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGaa < 3:150149/106‑1 (MQ=255) cTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGaa > 4:150149/1‑106 (MQ=255) tCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGgtgt > 5:30126/1‑148 (MQ=255) tCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGgtgt > 1:181682/1‑148 (MQ=255) tCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGgtgt > 7:52952/1‑148 (MQ=255) cTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAAc > 5:101037/1‑149 (MQ=255) cTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAAc < 4:45064/149‑1 (MQ=255) tACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAAccc > 6:197795/1‑149 (MQ=255) aCTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATg > 8:96604/1‑139 (MQ=255) aCTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATg < 7:96604/139‑1 (MQ=255) aCTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACccg > 6:11627/1‑149 (MQ=255) cTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACccgc > 5:338030/1‑149 (MQ=255) ttGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGa < 6:312415/132‑1 (MQ=255) ttGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGa > 5:312415/1‑132 (MQ=255) ttGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACccgcc < 7:85554/149‑1 (MQ=255) ttGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACccgcc > 6:65017/1‑149 (MQ=255) gAAAGCCGGTCTTACGTCAGGCTGGATACGTAGTCTTCGAAACCGAACTCGCGGTCGAGTTAGACGCTGCCGTCGAGCTGGTTGACGACGATGGTAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTgt < 5:311014/130‑2 (MQ=255) gAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACATCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCttca > 6:311014/1‑128 (MQ=255) ccaGCCTGTCGTAAGACCGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCgtg > 5:47075/3‑149 (MQ=255) aaaGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGttttt > 2:153451/1‑124 (MQ=255) aaaGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGttttt < 1:153451/124‑1 (MQ=255) cGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGTCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCGTGTCGAt < 5:65017/149‑1 (MQ=255) cGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCGTGTCGAt < 6:101037/149‑1 (MQ=255) ggTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCGTGTCGAt > 2:306457/1‑148 (MQ=255) | TTTGGAGATGTTCCGTGACGCGATGGCGATACGACCCAGTTCGTCGTTATGCTGCGCGCACTTGTGGGCCACCACCTTGGCGACACCTCCTGCACCAATGATAAGAACGTTCTTCTTCAATTTACCCTTTGCTCCTTACTTGAAAGCCGGTCTTACGACAGGCTGGAAACGTAGTCTTCGAAACCGAACTCGCGGACGACTTCGACGCTGCCGTCGAGCTGCTTGACCACGATGGAAGGCATCTTCAGCCCGTTGAACCAGTTTTTCTTGACCATGGTGTAACCCGCCGTGTCGAT > NC_002947/3330752‑3331047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |