Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,466,058	G→C	8.5%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,466,058	0	G	C	8.5%	209.9 / 7.7	68	noncoding (102/119 nt)	PP_mr39	P15 ncRNA
Reads supporting (aligned to +/- strand):  ref base G (33/29);  new base C (3/3);  total (36/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAGGC  >  NC_002947/3465918‑3466205                                                                                                                                             |                                                                                                                                                    ggcAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAg                                                                                                                                                     <  8:289198/141‑1 (MQ=255) ggcAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAg                                                                                                                                                     >  7:289198/1‑141 (MQ=255)  gcAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCggg                                                                                                                                            <  5:7670/149‑1 (MQ=255)   cAGTCTGGCCCGACCGGGATTGGCTAAATCGCCAGGGGTAGGTGTTTTCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGCTTCCCGACCgggg                                                                                                                                           <  8:252684/149‑1 (MQ=255)        tGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGGGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGttt                                                                                                                                       >  5:151765/1‑148 (MQ=255)        tGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGttt                                                                                                                                       >  4:321736/1‑148 (MQ=255)          gCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAg                                                                                                                                    >  1:177536/1‑149 (MQ=255)            ccGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTa                                                                                                                                  >  6:357735/1‑149 (MQ=255)              gAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCTTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGa                                                                                                                                     >  4:326521/1‑144 (MQ=255)              gAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTTGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGa                                                                                                                                     <  3:326521/144‑1 (MQ=255)               aaCGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATtc                                                                                                                               >  3:274054/1‑149 (MQ=255)                    gATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACTCCCGGTCGGGAAGCCGACCGGGGGTTTGa                                                                                                                                     >  1:63625/1‑138 (MQ=255)                    gATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACTCCCGGTCGGGAAGCCGACCGGGGGTTTGa                                                                                                                                     <  2:63625/138‑1 (MQ=255)                         gCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     >  3:291120/1‑149 (MQ=255)                             aaTCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCggcggc                                                                                                                 <  1:323669/149‑1 (MQ=255)                              aTCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGcc                                                                                                                <  1:179898/149‑1 (MQ=255)                                 gCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCt                                                                                                             >  1:42888/1‑149 (MQ=255)                                      gCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAg                                                                                                        <  4:291120/149‑1 (MQ=255)                                       cGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAgg                                                                                                       <  7:336186/149‑1 (MQ=255)                                           ggTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGa                                                                                                   <  6:151765/149‑1 (MQ=255)                                               tttGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGcc                                                                                               >  1:268091/1‑149 (MQ=255)                                                 tGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGCAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgg                                                                                             >  8:76852/1‑149 (MQ=255)                                                 tGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgg                                                                                             >  5:129614/1‑149 (MQ=255)                                                    gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtg                                                                                          >  3:50601/1‑149 (MQ=255)                                                     tagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtgg                                                                                         <  7:205495/149‑1 (MQ=255)                                                     tagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtgg                                                                                         <  3:86364/149‑1 (MQ=255)                                                          ataaGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATc                                                                                    >  2:68492/1‑149 (MQ=255)                                                          ataaGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATc                                                                                    >  5:368715/1‑149 (MQ=255)                                                                 gCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGcc                                                                              >  5:15859/1‑148 (MQ=255)                                                                   gTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAg                                                                           >  3:142601/1‑149 (MQ=255)                                                                    tAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGt                                                                          >  1:317791/1‑149 (MQ=255)                                                                    tAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGt                                                                          <  6:368715/149‑1 (MQ=255)                                                                        tCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGc                                                                       >  8:94076/1‑148 (MQ=255)                                                                          aTGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTa                                                                     <  2:177536/148‑1 (MQ=255)                                                                           tGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTAGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTaaa                                                                   >  8:287735/1‑149 (MQ=255)                                                                             aaTCTGTCCTCAAAGTGAATCGGTGTTGGTCAATGGCCTGAAAAAGAAAACCCCCGGTCGTGAAGCGGACCGGGGGTTTGAGTATGCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                  <  5:313262/148‑1 (MQ=255)                                                                             aaTCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                  <  1:68492/148‑1 (MQ=255)                                                                                      tctatgtgtATCTGTGTTGGTTAATGGCCTGAAAACCAAAACCCCGGGTGGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTGGATGGTGGACGCCGGGTGGGTATCGGCGCCTAGTg                                                                         <  8:121829/127‑1 (MQ=255)                                                                                      tCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCa                                                         >  3:271525/1‑148 (MQ=255)                                                                                      tCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGAATTCTCATGTTCGGCGGCACCTCGAAGGTGGACGCCGGGTGGGTATCGTCGCCTAGTg                                                                         >  7:121829/1‑132 (MQ=255)                                                                                        aaaGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                  <  1:25019/137‑1 (MQ=255)                                                                                        aaaGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                  >  2:25019/1‑137 (MQ=255)                                                                                        aaaGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCaaa                                                       <  4:50601/148‑1 (MQ=255)                                                                                        aaaGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAg                                                      <  3:236839/149‑1 (MQ=255)                                                                                            tGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAAt                                                  <  4:271525/149‑1 (MQ=255)                                                                                             gAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTaa                                                   >  2:358297/1‑147 (MQ=255)                                                                                                gcGGTGTTGGTCAAAGTCCTGAAAAACATAACCCCCGGTGGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCt                                              <  2:182196/148‑1 (MQ=255)                                                                                                 cGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGgcgc                                                                               <  4:77663/115‑1 (MQ=255)                                                                                                 cGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGgcgc                                                                               >  3:77663/1‑115 (MQ=255)                                                                                                   gtgtTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTgg                                            >  2:268969/1‑148 (MQ=255)                                                                                                     gtTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAg                                         >  7:124260/1‑149 (MQ=255)                                                                                                        ggTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTg                                      >  5:218501/1‑149 (MQ=255)                                                                                                          tCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGcc                                    <  5:357735/149‑1 (MQ=255)                                                                                                          tCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGcc                                    <  1:268969/149‑1 (MQ=255)                                                                                                            aaaGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCAc                                  <  7:94076/149‑1 (MQ=255)                                                                                                            aaaGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGCGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCAc                                  <  2:42888/149‑1 (MQ=255)                                                                                                                 ccTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGc                             <  3:321736/149‑1 (MQ=255)                                                                                                                     aaaaaCAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCgg                          >  5:239135/1‑148 (MQ=255)                                                                                                                         ctcaaacCCCCGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCaa                                                               <  5:68280/104‑1 (MQ=38)                                                                                                                         ctcaaacCCCCGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCaa                                                               >  6:68280/4‑107 (MQ=38)                                                                                                                           aaaacCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGt                                                     <  7:280946/115‑1 (MQ=255)                                                                                                                           aaaacCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGt                                                     >  8:280946/1‑115 (MQ=255)                                                                                                                           aaaacCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGc                   >  3:20106/1‑149 (MQ=255)                                                                                                                             aacCCCCGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGc                   >  3:9718/1‑147 (MQ=255)                                                                                                                                ccccGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTgg                                            <  7:166274/119‑1 (MQ=255)                                                                                                                                ccccGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTgg                                            >  8:166274/1‑119 (MQ=255)                                                                                                                                 cccGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGca              >  6:99527/1‑148 (MQ=255)                                                                                                                                 cccGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCAGGCAACGGCCAGca              >  8:179702/1‑148 (MQ=255)                                                                                                                                    ggTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAgg          <  2:317791/149‑1 (MQ=255)                                                                                                                                            aGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAGGc  <  2:268091/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                    GGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCCTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAGGC  >  NC_002947/3465918‑3466205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑