| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,692,619 | T→A | 6.2% | Q336L (CAG→CTG) | PP_3259 ← | acyl‑CoA dehydrogenase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,692,619 | 0 | T | A | 6.2% | 243.7 / 4.5 | 80 | Q336L (CAG→CTG) | PP_3259 | acyl‑CoA dehydrogenase‑related protein |
| Reads supporting (aligned to +/- strand): ref base T (34/40); new base A (2/3); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.10e-01 | |||||||||||
GCCCCGGCGGGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATGACCTG > NC_002947/3692471‑3692758 | gcCCCGGCGGGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAgct > 4:107025/1‑149 (MQ=255) cccGGCGGGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAgctgc > 7:97283/1‑149 (MQ=255) cggcggGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGctgctg < 3:6098/149‑1 (MQ=255) cggcggGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGctgctg < 2:106648/149‑1 (MQ=255) ggcggGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAGCTGGGCCAGCAGCTgg < 1:108062/149‑1 (MQ=255) gggCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGccc < 3:107025/149‑1 (MQ=255) gCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAg < 2:75906/149‑1 (MQ=255) cacaGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGc < 1:327756/149‑1 (MQ=255) cacaGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGc < 2:270601/149‑1 (MQ=255) acaGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGc > 1:361288/1‑148 (MQ=255) acaGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCa > 7:40920/1‑149 (MQ=255) aGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑c > 4:113091/1‑149 (MQ=255) aGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCCCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑c < 5:319987/149‑1 (MQ=255) gTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGc > 2:47196/1‑144 (MQ=255) gTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGc > 5:268916/1‑144 (MQ=255) tCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGc > 6:298378/1‑149 (MQ=255) aGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAg > 3:284029/1‑139 (MQ=255) aGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAg < 4:284029/139‑1 (MQ=255) aGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGt < 7:123559/149‑1 (MQ=255) aGGTCGCACGCGCCAGGGGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACGCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGt < 7:128729/149‑1 (MQ=255) ggTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTg > 2:66355/1‑149 (MQ=255) cACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGctct > 6:254718/1‑149 (MQ=255) cACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGctct < 2:196186/149‑1 (MQ=255) aCGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGccc > 7:12468/1‑117 (MQ=255) aCGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGccc < 8:12468/117‑1 (MQ=255) aCGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGctct > 7:223369/1‑148 (MQ=255) ccAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCa < 1:47196/149‑1 (MQ=255) cAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAg < 3:200901/149‑1 (MQ=255) cgcgcTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAacac < 6:268916/149‑1 (MQ=255) gcgcTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCCACTGGGCCAGCGGCTGGCCGAGCAT‑CGCCAGCTCACGCTCGGCGTGGCTCTGACGCAGGCACAcc > 8:119652/1‑149 (MQ=255) gcTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGCCTCTGACGCAGGAACACCgg > 5:291648/1‑149 (MQ=255) cTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGc < 2:361288/149‑1 (MQ=255) ctgcCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGt < 3:113091/148‑1 (MQ=255) ctgcCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTc < 8:40920/149‑1 (MQ=255) cctggCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGgc < 8:19292/146‑1 (MQ=255) cAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGgcg < 8:97283/149‑1 (MQ=255) aGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCgg < 8:179860/138‑1 (MQ=255) aGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCgg > 7:179860/1‑138 (MQ=255) gCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTc > 3:51040/1‑149 (MQ=255) cccAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGcc > 4:150387/1‑149 (MQ=255) ggCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGc > 3:83588/1‑148 (MQ=255) ccgcccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCgg > 2:31733/1‑121 (MQ=255) ccgcccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGa < 6:291648/149‑1 (MQ=255) ccgcccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACCCTCGGCGTGGCTCTGACGCAGGAACACCgg < 1:31733/121‑1 (MQ=255) gcccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCg < 3:275906/137‑1 (MQ=255) gcccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCg > 4:275906/1‑137 (MQ=255) ccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCAGCTgg < 7:196771/67‑1 (MQ=255) ccgcGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCAGCTgg > 8:196771/1‑67 (MQ=255) cgGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACtgctgc < 1:66355/149‑1 (MQ=255) gACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGa < 4:51040/149‑1 (MQ=255) gATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGa < 6:199143/93‑1 (MQ=255) gATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGa > 5:199143/1‑93 (MQ=255) gATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGaa > 4:324750/1‑149 (MQ=255) tCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACg > 3:250384/1‑149 (MQ=255) tCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCGTCGACAGACCg > 4:210334/1‑149 (MQ=255) ggTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCg > 1:218008/1‑149 (MQ=255) gTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCa < 4:223124/115‑1 (MQ=255) gTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCa > 3:223124/1‑115 (MQ=255) gTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGt < 3:324750/149‑1 (MQ=255) ggCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGccc > 1:214801/1‑149 (MQ=255) gCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCATGCGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGccc > 1:281535/1‑149 (MQ=255) gCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCg < 4:226741/131‑1 (MQ=255) gCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCg > 3:226741/1‑131 (MQ=255) tCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGa < 1:187014/130‑1 (MQ=255) tCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGa > 2:187014/1‑130 (MQ=255) aTAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCaa < 4:244382/148‑1 (MQ=255) tAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAgg < 6:336412/149‑1 (MQ=255) ttGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCAc > 1:122890/1‑149 (MQ=255) gCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACg < 2:281535/148‑1 (MQ=255) ccACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTc > 2:53679/1‑149 (MQ=255) cccGGCTGGCAACTGGGCCAGCTGCTTGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTg < 3:125833/127‑1 (MQ=255) cccGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTg > 4:125833/1‑127 (MQ=255) cGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTgg > 2:28693/1‑149 (MQ=255) cGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTgg < 4:83588/149‑1 (MQ=255) gCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCt < 8:223369/149‑1 (MQ=255) cTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGCCACGTCGGACGTGCCtt < 5:298378/149‑1 (MQ=255) gCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTAt < 2:214801/148‑1 (MQ=255) gCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATg < 1:53679/149‑1 (MQ=255) gCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCGCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTAt < 2:262420/148‑1 (MQ=255) aCTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATGAcc < 2:218008/149‑1 (MQ=255) aCTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATGAcc > 1:57536/1‑149 (MQ=255) tGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATGACCTg > 3:223956/1‑149 (MQ=255) tGGGCCAGCAGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCgg < 1:93178/84‑1 (MQ=255) tGGGCCAGCAGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCgg > 2:93178/1‑84 (MQ=255) | GCCCCGGCGGGCACAGTTGGCGTGAGTCGAGCCAGGTCGCACGCGCCAGGTGCGCGCTTTGCTGCCAGGCTGCCCAAGGCGTGCCGCCCGCGGACTGGATCAGGTTCTGGCTCATAGTTGCCACACCCCGGCTGGCAACTGGGCCAGCTGCTGGCCCAGCAT‑CGCCAGATCACGCTCGGCGTGGCTCTGACGCAGGAACACCGGCAGGTCGGCGCTCAGCCGGGCAAAATGACTGCTGCGACAGAACGGCGTGGCCCCCAAGGCACGTCCGACGTGGCTTATGACCTG > NC_002947/3692471‑3692758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |