| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,717,746 | A→T | 7.4% | M18K (ATG→AAG) ‡ | paaH ← | 3‑hydroxyacyl‑CoA dehydrogenase PaaC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,717,746 | 0 | A | T | 7.4% | 240.1 / 7.5 | 81 | M18K (ATG→AAG) ‡ | paaH | 3‑hydroxyacyl‑CoA dehydrogenase PaaC |
| Reads supporting (aligned to +/- strand): ref base A (41/34); new base T (4/2); total (45/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-01 | |||||||||||
AGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTGCAGGTCG > NC_002947/3717601‑3717894 | aGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATg < 3:213374/148‑1 (MQ=255) cAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCATGGGCGCCgg < 2:323756/149‑1 (MQ=255) aaCTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCAcc > 4:43693/1‑149 (MQ=255) tttCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGa > 3:334970/1‑148 (MQ=255) tttCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑t > 8:350119/1‑149 (MQ=255) tttCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCAACCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑t > 2:328795/1‑149 (MQ=255) tttCCTTTGTCCACCAGCCGGGCCAGTTGGAGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑t > 6:92116/1‑149 (MQ=255) cTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCAcc < 1:328795/149‑1 (MQ=255) tttGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGgcgc < 1:226559/134‑1 (MQ=255) tttGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGgcgc > 2:226559/1‑134 (MQ=255) gTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCAc < 1:339527/137‑1 (MQ=255) gTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCAc > 2:339527/1‑137 (MQ=255) tCCACGAGCCGTGCCAGTTGGCGATCGATTCCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTTGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCAc < 6:47271/149‑1 (MQ=255) tCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCAc < 7:350119/149‑1 (MQ=255) ccaccaGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCAcc < 3:10833/149‑1 (MQ=255) caccaGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCt > 7:303272/1‑149 (MQ=255) acccGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCGGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGACCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTg < 6:286156/149‑1 (MQ=255) accaGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTg > 3:184891/1‑149 (MQ=255) ccaGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTg > 1:84204/1‑148 (MQ=255) ccGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACAt > 6:311453/1‑149 (MQ=255) ccAGTTGGGGATGGTTACCCGTGAGCGCCTGGGCGGCAGCACCCGGGGGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACAttgctt < 6:92978/149‑1 (MQ=255) aGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACAttgcttgc > 1:102555/1‑149 (MQ=255) ttGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGa < 8:326109/149‑1 (MQ=255) ttGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGa < 8:262343/149‑1 (MQ=255) ggCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGt > 8:155351/1‑149 (MQ=255) gatcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACAGTGCTTGCGAGTGCg > 4:81990/1‑149 (MQ=255) atcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCgg > 8:19326/1‑149 (MQ=255) atACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCa < 7:279578/148‑1 (MQ=255) atACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCa > 8:279578/1‑148 (MQ=255) ccGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCAtttt > 4:172196/1‑148 (MQ=255) ccGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCAtttt > 3:48357/1‑148 (MQ=255) cGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCCCCGGCACATTGCTTGCGAGTGCGGCCCtttt > 6:261023/1‑147 (MQ=255) aCCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑Agcgc > 6:154631/1‑149 (MQ=255) aCCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑Agcg < 3:43693/148‑1 (MQ=255) gCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGcccc < 2:84204/149‑1 (MQ=255) ggcggcAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGaa < 1:301395/149‑1 (MQ=255) aCCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGgcgt > 5:243734/1‑149 (MQ=255) aCCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCATGGGCGCCggta > 6:317441/1‑80 (MQ=255) aCCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCATGGGCGCCggta < 5:317441/82‑3 (MQ=255) cccGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGgcgtg > 4:123825/1‑149 (MQ=255) ccGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGgcgtgc > 2:126634/1‑149 (MQ=255) cGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTg < 4:196920/135‑1 (MQ=255) cGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTg > 3:196920/1‑135 (MQ=255) gCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGttt < 2:219461/149‑1 (MQ=255) gTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGtt < 4:184891/149‑1 (MQ=255) ttATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGtt > 8:294886/1‑148 (MQ=255) ttATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGtt > 2:42036/1‑148 (MQ=255) ttATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTc < 5:311453/149‑1 (MQ=255) ttATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTc < 7:19326/149‑1 (MQ=255) aTCGTAGAGCTTGACGTGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCa < 8:66306/148‑1 (MQ=255) tCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATg < 5:290650/149‑1 (MQ=255) tAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAg < 3:123825/149‑1 (MQ=255) agagCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGttt < 7:350180/138‑1 (MQ=255) agagCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGttt > 8:350180/1‑138 (MQ=255) gagCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGc < 1:126634/149‑1 (MQ=255) tGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGa < 8:143081/116‑1 (MQ=255) tGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGa > 7:143081/1‑116 (MQ=255) aCGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGAGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACg > 5:307956/1‑149 (MQ=255) ggggTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGcc > 1:135770/1‑149 (MQ=255) gTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTc > 1:353238/1‑149 (MQ=255) tGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCAGATTGCGTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTGAACGCCTTca < 5:261023/149‑2 (MQ=255) tGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGCGAACGCCTTca < 4:334970/149‑2 (MQ=255) ccggccTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGt < 6:223014/123‑1 (MQ=255) ccggccTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGt > 5:223014/1‑123 (MQ=255) ccggccTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCgg < 5:154631/149‑1 (MQ=255) gCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCg > 6:113492/1‑149 (MQ=255) cgcgACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCgg < 4:164748/138‑1 (MQ=255) cgcgACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCgg > 3:164748/1‑138 (MQ=255) gcgACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTg > 6:176825/1‑149 (MQ=255) aCCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTgcgc < 2:353238/149‑1 (MQ=255) ccTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGCGCGGCCATTTTC‑AGCGcccc < 7:310927/85‑1 (MQ=255) ccTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGCGCGGCCATTTTC‑AGCGcccc > 8:310927/1‑85 (MQ=255) ggCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGc > 5:244908/1‑149 (MQ=255) tgccGGCGCCATGGGCGCCGGCACCGAGTCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAgg > 1:204115/3‑149 (MQ=255) ccGGCGCCATGGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGgcgc > 6:376216/1‑149 (MQ=255) ccGGCGCCATGGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGgcgc > 3:67097/1‑149 (MQ=255) cGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTgcgc > 4:158323/1‑136 (MQ=255) cGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTgcgc < 3:158323/136‑1 (MQ=255) gcgcCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACACCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTg > 3:196513/1‑148 (MQ=255) cccATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTGCAgg > 3:58446/1‑149 (MQ=255) cATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCTAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTGCAGGt > 1:101764/1‑149 (MQ=255) aTGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTGCAGGTcg > 3:12518/1‑149 (MQ=255) | AGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATACCGGCGCCCATGGCGCCGGCACCGA‑TCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTC‑AGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCTGCAGGTCG > NC_002947/3717601‑3717894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |