| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 280,199 | A→C | 5.2% | L17R (CTG→CGG) ‡ | sctS ← | sulfur compound ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 280,199 | 0 | A | C | 5.2% | 232.9 / 2.1 | 76 | L17R (CTG→CGG) ‡ | sctS | sulfur compound ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (39/33); new base C (2/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
CGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCC > NC_002947/280051‑280347 | cgTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTca < 3:31867/149‑1 (MQ=255) gTGCCGCGTAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGTCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTca < 8:323614/148‑1 (MQ=255) ccGCGGTATAACGACACGTATACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCTACAGCCGCATCAGCGCCAGGGCAAATCCCAGCACCAGACCGAATAACATTCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTcagca < 7:232853/148‑1 (MQ=255) gaagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAgg < 8:110725/149‑1 (MQ=255) gaagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAgg < 1:234320/149‑1 (MQ=255) gaagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGAGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAgg < 2:99427/149‑1 (MQ=255) aagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAggg > 5:130303/1‑149 (MQ=255) gaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgcg > 6:75722/1‑149 (MQ=255) cccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGcgcg < 8:73589/137‑1 (MQ=255) cccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGcgcg > 7:73589/1‑137 (MQ=255) cgcgCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAg < 4:86998/149‑1 (MQ=255) gcgcCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg > 2:341718/1‑135 (MQ=255) gcgcCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 1:341718/135‑1 (MQ=255) aGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAg < 5:75722/148‑1 (MQ=255) aGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCAAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCCTATAACCCGCGCCCATCAGAAGCAAGGGCGCGGAGTCGCCAACGAGTTGCA‑‑‑GGCATACAGc > 2:345621/1‑149 (MQ=255) cGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCtt < 1:282973/142‑1 (MQ=255) cGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCtt > 2:282973/1‑142 (MQ=255) ggCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGAt > 1:345102/1‑149 (MQ=255) ggCAGAATATACCACAGCCGCATCAGCGCCAGGGCAAACCCCAGAACCAGACCGAAGAAAATGCCGCCGACACTGAGCAGCACCGTAAAACCCGCACCCTACAGCAGGAAGGGAGCGGAGACGACAACAAGTTGCA‑‑‑GGCTTTCAGCGa > 2:279717/1‑148 (MQ=255) gCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGAt > 2:156010/1‑148 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCa > 4:250136/1‑149 (MQ=255) tCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCAttttg > 3:43665/1‑147 (MQ=255) tCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTgg > 4:272411/1‑149 (MQ=255) cGACTGCCGCATCAGCGCCAGGGCAAAGCGCAGCACCAGACCGAAGAACATGCCGCCTACACTGTGCATCAGCGTATAAGCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGt < 1:279717/146‑1 (MQ=255) cGACAGCCGCATCTGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACGCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGt < 7:322944/146‑1 (MQ=255) cGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGt < 6:130303/146‑1 (MQ=255) gACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGCCa > 3:272651/1‑149 (MQ=255) ccGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTc < 4:283019/126‑1 (MQ=255) ccGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTc > 3:283019/1‑126 (MQ=255) aTCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCAcc > 1:129361/1‑148 (MQ=255) gcgcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAg > 2:119409/1‑148 (MQ=255) gcgcCAGGGCAAAGCCCAGCAACAGACCGAAGAACATGCCGCCGACACTGAGAAGCACCGTATAAACCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGATTTCAGCGATCATTTGGTGACATCGTCACCGAAg > 4:185492/1‑148 (MQ=255) gcCAGGGCAAAGCCCAGCCCCAGACCGACGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTAc < 8:235493/149‑1 (MQ=255) gcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTg < 5:180321/128‑1 (MQ=255) gcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTg > 6:180321/1‑128 (MQ=255) gcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa > 1:120817/1‑145 (MQ=255) gcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa < 2:120817/145‑1 (MQ=255) cAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg > 7:75062/1‑148 (MQ=255) aaGCCCAGCACCACCCCGAAGACCTTGCCGCCGACACTGAGCTGCACCGTATAACCCGCGCCCTTCAGCAGGAAGCGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATTGGCACCGAAGTACTTCTCGGAc < 7:234091/149‑1 (MQ=255) aGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGa > 4:59511/1‑147 (MQ=255) cAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCtt > 2:162161/1‑149 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 3:250136/149‑1 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg > 2:299404/1‑149 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 2:129361/149‑1 (MQ=255) cAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAg > 1:214125/1‑149 (MQ=255) cAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAg > 7:211022/1‑149 (MQ=255) cAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAg > 6:306628/1‑149 (MQ=255) gACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCg > 6:118394/1‑149 (MQ=255) ccGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTg < 5:295975/149‑1 (MQ=255) cGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGc > 5:103307/1‑149 (MQ=255) cGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGc < 3:59511/149‑1 (MQ=255) gaagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGcc < 3:272411/149‑1 (MQ=255) gccgccGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGc > 2:131922/1‑131 (MQ=255) gccgccGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGc < 1:131922/131‑1 (MQ=255) gccgccGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt > 4:149810/1‑149 (MQ=255) ccgccgACCCTGAGCACCACGGTGAAACCGGCGCACTTCAGCAGGATGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt < 5:55704/148‑1 (MQ=255) cgccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGa < 5:306628/149‑1 (MQ=255) gcctACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGTAAGGTCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAg < 1:345621/149‑1 (MQ=255) ccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGc < 1:156010/149‑1 (MQ=255) gACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCtt < 8:211022/149‑1 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt < 2:223616/138‑1 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt > 1:223616/1‑138 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGa > 6:329091/1‑149 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGa > 5:250068/1‑149 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGa > 7:111243/1‑149 (MQ=255) agcagcACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATg < 6:103307/149‑1 (MQ=255) ataACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGAt > 1:237490/1‑149 (MQ=255) ataACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGAt > 5:129222/1‑149 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTTCATCTCCCTTTCAGCCCAGATTTCGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgtt < 1:119409/148‑1 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTCGTCGATGGCCTTGTTGAt < 2:211043/148‑1 (MQ=255) aaCCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATgg > 2:156842/1‑149 (MQ=255) gcgcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGcc < 8:75062/149‑1 (MQ=255) gcgcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGcc < 2:214125/149‑1 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCaa < 1:162161/149‑1 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCaa > 2:41379/1‑149 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTCGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCaa > 8:285106/1‑149 (MQ=255) cccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGAt > 4:215791/1‑127 (MQ=255) cccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGAt < 3:215791/127‑1 (MQ=255) cTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAg > 6:148913/1‑149 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAAc < 7:63406/143‑1 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAAc > 8:63406/1‑143 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTcc < 6:129222/149‑1 (MQ=255) | CGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCA‑‑‑GGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCC > NC_002947/280051‑280347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |