| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,984,040 | G→T | 7.6% | intergenic (+34/+156) | ilvE → / ← PP_3512 | branched‑chain‑amino acid aminotransferase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,984,040 | 0 | G | T | 7.6% | 202.6 / 5.8 | 66 | intergenic (+34/+156) | ilvE/PP_3512 | branched‑chain‑amino acid aminotransferase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (35/26); new base T (2/3); total (37/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
TTCCACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGT > NC_002947/3983893‑3984188 | ttCCACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAg > 1:280/1‑148 (MQ=255) cACGACCTGTAAAAGGTCTGCCCGGTTACCCAGAAGCTCTACAACGTGCTTACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAAt < 8:109250/149‑1 (MQ=255) cACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAAt > 4:146965/1‑149 (MQ=255) ccTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCAt > 3:172711/1‑149 (MQ=255) ggAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGcc > 2:115444/1‑149 (MQ=255) aaaaGGTCGGCCCGGTTACCCAGAAGCTCTACTACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCATTGCTGGCATGcccc < 1:188894/149‑1 (MQ=255) gTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCATTGCTGGCATGccc < 1:116169/143‑1 (MQ=255) gTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCATTGCTGGCATGccc > 2:116169/1‑143 (MQ=255) ggCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGc > 6:182363/1‑134 (MQ=255) gCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCGGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCa > 5:321872/1‑149 (MQ=255) aCCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGttt < 8:302461/148‑1 (MQ=255) aCCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTa > 1:160096/1‑149 (MQ=255) cccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTac < 4:233329/149‑1 (MQ=255) ccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTaca < 1:339790/149‑1 (MQ=255) ccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTac > 6:169571/1‑148 (MQ=255) ccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTac < 5:169571/148‑1 (MQ=255) gCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGccc > 5:334266/1‑149 (MQ=255) ctACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCGCt > 5:276001/1‑149 (MQ=255) ctACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCt > 2:172926/1‑149 (MQ=255) tACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGTACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGccccc < 4:76478/147‑1 (MQ=255) tACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGTACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGccccc > 3:76478/1‑147 (MQ=255) cAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGt < 2:280/149‑1 (MQ=255) cAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCACCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTc < 5:282296/147‑1 (MQ=255) aaCGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCg > 2:266847/1‑147 (MQ=255) aCGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAg < 1:172926/149‑1 (MQ=255) aCGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAg < 3:146965/149‑1 (MQ=255) aCCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCGGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCgg < 6:321872/147‑1 (MQ=255) cAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAAGGCGGGGCTTGCCAGAAATGCCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCATCGTAGAACCGGGTTTAcccc > 1:115941/1‑148 (MQ=255) cAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCAtg < 3:28733/110‑1 (MQ=255) cAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCAtg > 4:28733/1‑110 (MQ=255) cAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgc < 6:334266/148‑1 (MQ=255) agagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgcg > 8:164224/1‑148 (MQ=255) gcgATGTTGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAAGGCTTCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGc < 5:216563/149‑1 (MQ=255) gcgATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGTGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGc < 7:164224/149‑1 (MQ=255) gcgATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGc > 6:93497/1‑149 (MQ=255) gATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCca < 4:172711/149‑1 (MQ=255) aTGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCca > 7:104179/1‑148 (MQ=255) gTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCacac > 8:31227/1‑149 (MQ=255) gagGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCg > 8:18812/1‑149 (MQ=255) gCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGcc < 5:198576/79‑1 (MQ=255) gCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGcc > 6:198576/1‑79 (MQ=255) gCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCgc > 7:216438/1‑147 (MQ=255) cGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCgccagcc > 2:350264/1‑148 (MQ=255) ggCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaa‑taat < 1:350264/149‑1 (MQ=255) tGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGcc > 5:8982/1‑149 (MQ=255) ctCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTgg > 4:362649/2‑149 (MQ=255) gTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGga < 8:104179/148‑1 (MQ=255) tCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaa‑ta > 6:43239/1‑137 (MQ=255) tCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaa‑ta < 5:43239/137‑1 (MQ=255) ggTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCAc > 2:129517/1‑149 (MQ=255) gTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCAcc < 2:160096/149‑1 (MQ=255) gCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCGACGTTTTTTCATGTGTTTACACGGCCCCATCGTAGGAGCGGGTTTACCAGCGAATAGGCCACACCCGCCAGCCAA‑AAATCCCTGGGAGATCACCGtt > 8:19934/1‑149 (MQ=255) cTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGt > 6:379361/1‑149 (MQ=255) cTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGt > 1:209198/1‑149 (MQ=255) aaCGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGt < 7:31227/149‑1 (MQ=255) cGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGc < 7:18812/149‑1 (MQ=255) gCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTg > 6:35799/1‑147 (MQ=255) gCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTg > 2:270264/1‑147 (MQ=255) gCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCa > 8:83258/1‑138 (MQ=255) gTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCAt > 3:319128/1‑147 (MQ=255) aaa‑‑CGGGGCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGga > 7:122077/1‑115 (MQ=38) aaa‑‑CGGGGCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGga < 8:122077/115‑1 (MQ=38) aa‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAACTAATGCCTGGGAGATCACCATTGTCAGTGCAGCCGCATTAGCGGGc < 1:266847/149‑1 (MQ=255) aa‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGtt < 8:186218/124‑1 (MQ=255) gCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGc > 2:310567/1‑134 (MQ=255) gCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGc < 1:310567/134‑1 (MQ=255) gCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGcc > 5:183467/1‑149 (MQ=255) gCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGTGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGt < 7:19934/149‑1 (MQ=255) gCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGt < 3:362649/149‑1 (MQ=255) | TTCCACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAA‑‑CGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAA‑TAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGT > NC_002947/3983893‑3984188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |