Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,051,286 T→G 7.3% Q390P (CAG→CCG)  PP_3571 ← acetylornithine deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,051,2860TG 7.3% 150.3 / 2.5 51Q390P (CAG→CCG) PP_3571acetylornithine deacetylase
Reads supporting (aligned to +/- strand):  ref base T (24/23);  new base G (2/2);  total (26/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

CCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGATGCCCGCCTGGTCGAA  >  NC_002947/4051141‑4051425
                                                                                                                                                 |                                                                                                                                           
ccGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGtt                                                                                                                                          >  2:197128/1‑149 (MQ=255)
    aCGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAg                                                                                                                                      <  7:93000/149‑1 (MQ=255)
       tGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACTCACTCGTGGTCGGCTTGTATGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCGATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTa                                                                                                                                   <  7:239885/149‑1 (MQ=255)
         cAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAACAGGCTTGAgggtt                                                                                                                                  <  7:101682/148‑4 (MQ=255)
          aaTACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTc                                                                                                                                <  1:197128/149‑1 (MQ=255)
                  atcGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGc                                                                                                                         >  6:19180/1‑148 (MQ=255)
                  atcGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGCGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGc                                                                                                                         >  6:379976/1‑148 (MQ=255)
                     gAGCCAGGGGCGTTCTCGGGCAAAGACATCGACATCGCACTCGTGGTCGGCCGGCTGGTCATGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTc                                                                                                                      <  6:342997/148‑1 (MQ=255)
                     gAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTca                                                                                                                     <  2:187102/149‑1 (MQ=255)
                       gCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTTCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTccacca                                                                                                                           >  7:119991/1‑141 (MQ=255)
                       gCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTccacca                                                                                                                           <  8:119991/141‑1 (MQ=255)
                        ccAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTcag                                                                                                                    >  3:219936/1‑147 (MQ=255)
                        ccAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCAACCCCCGGCGCAAACCACAACACGGTTTGAGGTAGTCCACCAGCAAcagcc                                                                                                                  >  8:124913/1‑148 (MQ=255)
                           ggggCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTcagca                                                                                                                  <  7:75421/146‑1 (MQ=255)
                           ggggCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGATTGAGGTAGTCCACCAGCCTcagca                                                                                                                  >  8:75421/1‑146 (MQ=255)
                                   ctcGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAACAGGCTTGAgggt                                                                                                                                   <  5:272044/121‑3 (MQ=255)
                                   ctcGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAACAGGCTTGAgggt                                                                                                                                   >  6:272044/1‑119 (MQ=255)
                                          aaaGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCcgc                                                                                                >  5:292748/1‑149 (MQ=255)
                                          aaaGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCcgc                                                                                                >  3:130288/1‑149 (MQ=255)
                                                  cGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGGACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTcag                                                                                                                    >  7:340867/1‑121 (MQ=255)
                                                  cGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGGACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTcag                                                                                                                    <  8:340867/121‑1 (MQ=255)
                                                         gCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGacac                                                                                 >  8:320852/1‑149 (MQ=255)
                                                                       ccTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATcc                                                                   <  7:320852/149‑1 (MQ=255)
                                                                           cAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACAGACAAACTCAAACGGCt                                                               >  2:141931/1‑149 (MQ=255)
                                                                            aGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGac                                                                                   <  7:64362/128‑1 (MQ=255)
                                                                            aGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGac                                                                                   >  8:64362/1‑128 (MQ=255)
                                                                              gTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTtgt                                                            <  5:19180/149‑1 (MQ=255)
                                                                               tCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCACGCAACTGCTCGACACTGACAAACTCATCCGGCTtgtg                                                           >  2:55460/1‑149 (MQ=255)
                                                                                   ggCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTACACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGccc                                                       <  5:379976/149‑1 (MQ=255)
                                                                                    gCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCt                                                      <  4:130288/149‑1 (MQ=255)
                                                                                    ccGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCt                                                      <  6:214647/148‑1 (MQ=255)
                                                                                             tGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATACGGCTTGTGGCCCTGGTCCAtgc                                             >  5:80556/1‑149 (MQ=255)
                                                                                               aaCCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGCGGTAGTCCCCCAGCCTCAGCAGCATGGCCGCCAAGCCGCGCACCTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCAtgctg                                           >  1:263405/1‑149 (MQ=255)
                                                                                               aaCCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCCCCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCAtgctg                                           >  1:268483/1‑149 (MQ=255)
                                                                                                 ccgccgGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAAc                                                                         <  1:345157/117‑1 (MQ=255)
                                                                                                   gccgGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATc                                                                    <  6:166623/120‑1 (MQ=255)
                                                                                                   gccgGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATc                                                                    >  5:166623/1‑120 (MQ=255)
                                                                                                          ccGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATcc                                                                   >  1:301257/1‑114 (MQ=255)
                                                                                                          ccGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATcc                                                                   <  2:301257/114‑1 (MQ=255)
                                                                                                               cTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCAcacca                           >  4:188238/1‑149 (MQ=255)
                                                                                                                tGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCAcaccac                          >  4:141450/1‑149 (MQ=255)
                                                                                                                    gCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTg                      <  4:219936/149‑1 (MQ=255)
                                                                                                                    gCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTg                      <  5:49489/149‑1 (MQ=255)
                                                                                                                        cATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGa                  >  4:137191/1‑149 (MQ=255)
                                                                                                                         aTCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGAt                 <  6:292748/149‑1 (MQ=255)
                                                                                                                                      aCCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTgg                     >  6:334614/1‑132 (MQ=255)
                                                                                                                                      aCCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTgg                     <  5:334614/132‑1 (MQ=255)
                                                                                                                                      aCCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGATGCCCGCCTGGTc     >  5:352010/1‑148 (MQ=255)
                                                                                                                                        ccTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGATGCCCGCCTGGTCGaa  <  6:352010/149‑1 (MQ=255)
                                                                                                                                               ccTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAggg                                     >  8:179177/1‑107 (MQ=255)
                                                                                                                                               ccTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAggg                                     <  7:179177/107‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                           
CCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGACAACGCACTCGTGGTCGGCCTGCAGGTCAAGGCGACCTTCTGAACCGCCGGGGCCGCACTGCGGCCCCATCCGCCGGCGCAACCCTCAAGCCTGTTTGAGGTAGTCCACCAGCCTCAGCAGCATGGCATCACAGCCGCGCAACTGCTCGACACTGACAAACTCATCCGGCTTGTGGCCCTGGTCCATGCTGCCAGGGCCGCACACCACGGTGGGGATGCCCGCCTGGTCGAA  >  NC_002947/4051141‑4051425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑