New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5545321 =NA (NA)51 (1.550) 43/284 0.0 100% intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NC_002947 = 5621245 0 (0.000)coding (19/774 nt) PP_4939 hypothetical protein

Only 100 of 112 total aligned reads displayed.

GCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCC  >  NC_002947/5621098‑5621392
                                                                                                                                                   |                                                                                                                                                   
gCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACT                                                                                                                                                     <  4:145599‑M2/148‑1 (MQ=255)
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                     <  7:82716‑M2/2‑1 (MQ=255)
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                     <  1:80183‑M2/2‑1 (MQ=255)
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                     >  8:76699‑M2/147‑148 (MQ=255)
 attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    <  7:167194‑M2/3‑1 (MQ=255)
 attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                     >  8:48579‑M2/146‑147 (MQ=255)
  ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct                                                                                                                                                   <  4:173463‑M2/4‑1 (MQ=255)
   tgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                                  <  1:6990‑M2/5‑1 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggctcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  1:99976‑M2/142‑147 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  1:174668‑M2/142‑147 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  8:167169‑M2/142‑147 (MQ=255)
     gCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctat                                                                                                                                                >  5:49607‑M2/1‑143 (MQ=255)
     gCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctat                                                                                                                                                >  5:77924‑M2/1‑143 (MQ=255)
      gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                <  2:191308‑M2/7‑1 (MQ=255)
      gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                >  5:61213‑M2/141‑147 (MQ=255)
           tGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaac                                                                                                                                           <  5:3806‑M2/147‑11 (MQ=255)
            tagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGaaaa                                                                                                                                         <  3:108094‑M2/14‑1 (MQ=255)
              acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaa                                                                                                                                       >  3:145599‑M2/1‑134 (MQ=255)
              acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaaca                                                                                                                                          <  6:130310‑M2/145‑12 (MQ=255)
                aGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaaga                                                                                                                                     >  3:41956‑M2/1‑132 (MQ=255)
                      gtcgCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataaccc                                                                                                                               <  7:80806‑M2/148‑23 (MQ=255)
                         ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGAtt                                                                                                                             <  8:167494‑M2/26‑1 (MQ=255)
                          ccAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactg                                                                                                                           <  4:25547‑M2/148‑27 (MQ=255)
                           cAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATAGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactg                                                                                                                           <  4:99389‑M2/147‑27 (MQ=255)
                            agagTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgtt                                                                                                                         <  1:83699‑M2/148‑29 (MQ=255)
                             gctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTc                                                                                                                        <  8:154949‑M2/31‑1 (MQ=255)
                               tgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTcc                                                                                                                       >  1:37579‑M2/116‑147 (MQ=255)
                                   ctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                     >  5:103559‑M2/112‑113 (MQ=255)
                                    tacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    <  6:103559‑M2/3‑1 (MQ=255)
                                     ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttcta                                                                                                                  >  7:164018‑M2/1‑111 (MQ=255)
                                     ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttcta                                                                                                                  >  6:181886‑M2/1‑111 (MQ=255)
                                       tgatgaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcg                                                                                                               <  5:33050‑M2/147‑39 (MQ=255)
                                       ccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAACGCGCACCGGATTCCCTACGCATTACGa                                                                                                              >  8:69608‑M2/108‑148 (MQ=255)
                                           gaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaa                                                                                                          >  6:77450‑M2/1‑105 (MQ=255)
                                           atcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAt                                                                                                          <  3:25547‑M2/45‑1 (MQ=255)
                                            tcagtcggggaatgcttttctagatctcgatgtcagggcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATc                                                                                                         <  8:125400‑M2/46‑1 (MQ=255)
                                             cagtcggcgaatgcttttctagatctcgatgtcagggcagatctgacgtcatgcgcatactgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCg                                                                                                        <  8:139033‑M2/47‑1 (MQ=255)
                                                tcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGcc                                                                                                     >  8:4053‑M2/99‑148 (MQ=255)
                                                 cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacag                                                                                                     >  2:83699‑M2/1‑99 (MQ=255)
                                                 cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCAAGACGAGCGTGACGTCAATtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacagg                                                                                                    <  2:176381‑M2/148‑50 (MQ=255)
                                                 cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGGGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacag                                                                                                     >  4:112898‑M2/1‑99 (MQ=255)
                                                   gcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCtt                                                                                                   <  7:4053‑M2/52‑1 (MQ=255)
                                                    gcgAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgc                                                                                                 <  2:115164‑M2/148‑53 (MQ=255)
                                                    gcgAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgc                                                                                                 <  3:12406‑M2/148‑53 (MQ=255)
                                                          gggCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg                                                                                           <  4:25021‑M2/148‑59 (MQ=255)
                                                           ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAAccc                                                                                          >  2:148191‑M2/88‑148 (MQ=255)
                                                               cgGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaat                                                                                      >  1:191953‑M2/1‑85 (MQ=255)
                                                                      gtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggc                                                                                <  7:41227‑M2/147‑70 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                              >  6:34817‑M2/75‑147 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                              >  3:132003‑M2/75‑147 (MQ=255)
                                                                        aGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCAAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa                                                                             >  6:25779‑M2/1‑76 (MQ=255)
                                                                         atgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGc                                                                                <  1:60482‑M2/71‑1 (MQ=255)
                                                                           gtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGaaa                                                                          <  4:180797‑M2/77‑1 (MQ=255)
                                                                             tCGAAACTCTCAAGGTTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgctgggtcaatggcggcgaagtgtt                                                                        >  3:99389‑M2/1‑71 (MQ=255)
                                                                               gAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                      <  5:167824‑M2/148‑80 (MQ=255)
                                                                                tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                                     >  5:174668‑M2/67‑148 (MQ=255)
                                                                                aaaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac                                                                     >  8:80806‑M2/1‑68 (MQ=255)
                                                                                aaaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                      >  2:105243‑M2/1‑68 (MQ=255)
                                                                                aaaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                      >  4:12406‑M2/1‑68 (MQ=255)
                                                                                aaaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                      >  1:115164‑M2/1‑68 (MQ=255)
                                                                                 gcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                                    >  6:37361‑M2/66‑148 (MQ=255)
                                                                                    tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                 <  4:57943‑M2/148‑85 (MQ=255)
                                                                                    tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                 >  8:48467‑M2/1‑64 (MQ=255)
                                                                                      tcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttct                                                               <  7:87807‑M2/148‑87 (MQ=255)
                                                                                        aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACTACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctat                                                             <  1:196034‑M2/148‑89 (MQ=255)
                                                                                         gacgtcatgcgcatcctgtttgctgtgcgacatcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCTGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGAt                                                            <  7:69608‑M2/91‑1 (MQ=255)
                                                                                         gacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGAt                                                            >  6:7693‑M2/58‑148 (MQ=255)
                                                                                          gggTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatac                                                           <  7:139033‑M2/148‑91 (MQ=255)
                                                                                           ggTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacg                                                          <  1:124424‑M2/148‑92 (MQ=255)
                                                                                           cgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTa                                                               <  7:71009‑M2/88‑1 (MQ=255)
                                                                                            gtcatgcgcatcctggttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAACAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGcc                                                         <  4:7687‑M2/94‑1 (MQ=255)
                                                                                               tCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggt                                                      >  8:67184‑M2/1‑53 (MQ=255)
                                                                                                tgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAg                                                      <  5:7693‑M2/97‑1 (MQ=255)
                                                                                                     atcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAg                                                >  2:82096‑M2/46‑148 (MQ=255)
                                                                                                           tttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCCCCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAg                                          >  8:71674‑M2/40‑148 (MQ=255)
                                                                                                           tttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAg                                          >  7:96667‑M2/40‑148 (MQ=255)
                                                                                                           tttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCAGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAg                                          >  3:121772‑M2/40‑148 (MQ=255)
                                                                                                            cGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgt                                         <  8:114349‑M2/148‑109 (MQ=255)
                                                                                                              aaCCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc                                       >  5:75560‑M2/1‑38 (MQ=255)
                                                                                                                ccGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccg                                     <  4:16315‑M2/148‑113 (MQ=255)
                                                                                                                 cGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccga                                    >  4:59161‑M2/1‑35 (MQ=255)
                                                                                                                      acaACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagggaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctataagtggtcacagcaagctgtgccgacaggg                               <  6:126904‑M2/148‑119 (MQ=255)
                                                                                                                       cagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGc                              <  2:148365‑M2/121‑1 (MQ=255)
                                                                                                                           gcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGa                           >  2:31863‑M2/24‑147 (MQ=255)
                                                                                                                              tCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac                         >  6:3806‑M2/1‑22 (MQ=255)
                                                                                                                                acgacgAGCGTGACGTCACTtctatcaaacaaaagctaacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcccagcaagctgtgccgccagggattaacgccg                     <  7:125400‑M2/148‑129 (MQ=255)
                                                                                                                                     agggctgggtgatCTCTCATTTGAAAAGCGCACCGGATGCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGt                <  1:80098‑M2/135‑1 (MQ=255)
                                                                                                                                       ggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTgg              <  1:131138‑M2/137‑1 (MQ=255)
                                                                                                                                           gggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGcc          >  4:59717‑M2/8‑148 (MQ=255)
                                                                                                                                             gtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCt         <  1:595‑M2/142‑1 (MQ=255)
                                                                                                                                             cGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg         >  3:67739‑M2/1‑7 (MQ=255)
                                                                                                                                              tgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGa       <  1:82096‑M2/144‑1 (MQ=255)
                                                                                                                                                 aCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcgg                                                                                 <  1:56479‑M2/71‑69 (MQ=255)
                                                                                                                                                  cTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggc                                                                                >  2:56479‑M2/1‑2 (MQ=255)
                                                                                                                                                   ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcgatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  1:24310‑M2/148‑148 (MQ=255)
                                                                                                                                                   ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  7:100309‑M2/148‑148 (MQ=255)
                                                                                                                                                   ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  1:178067‑M2/148‑148 (MQ=255)
                                                                                                                                                   ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  1:171075‑M2/148‑148 (MQ=255)
                                                                                                                                                   TCTCATTTGAAAAGCGCACCGGCTTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCGTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGAGcc  >  2:92310‑M2/1‑148 (MQ=255)
                                                                                                                                                   TCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGcc  >  5:84790‑M2/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCC  >  NC_002947/5621098‑5621392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.