Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	69.4 / NA	21	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (7/14);  total (7/14)

CTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCA  >  NC_002947/6013745‑6014025                                                                                                                                             |                                                                                                                                             cTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGTCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGTAGCGGGCGTGCCCGCGAATg                                                                                                                                       <  8:110651/148‑1 (MQ=255)               ggcgcgGGACGGTGGTGGGGTCAGCTTCATCGAATACACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGAGCAGCACAGGGCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCtttt                                                                                                                         <  8:58520/146‑1 (MQ=37)                       acggtggtGGGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGTAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                                 <  4:107537/146‑1 (MQ=255)                               gtggtCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACCCCCCCGCCCACAGGTGCCGCACAGGTCTCGAACGCGGTGGCGTGACGGTGGGAGCGGGCGGGCCCGCGCATTGCCGCCACCCATTTATAATGTTggcgcccg                                                                                                         >  4:57251/1‑146 (MQ=255)                                    cAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCATGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCg                                                                                                    <  3:157261/148‑1 (MQ=255)                                       cTTCATCGAATAAACGCGACACCTGCTTCGCGGGCCCCCCCCCACCCACACGTGCAGCCCACGGGTGGCACGCGGTGGCGGGCCGGTGGGGGCGGGCGGGCCCCCGCAAGGGCCCCACCCGTTTTTATGGTTTGCGCccccccccccc                                                                                                 >  4:39036/1‑147 (MQ=255)                                            tCGAATAACCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaac                                                                                            <  3:57251/148‑1 (MQ=255)                                                  aaccgcgACACCTGCTTCGCGGGCACGCCCGCTCCCACCGGTGCAGCACAGGTCTCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAgcgc                                                                                      <  5:156651/145‑1 (MQ=255)                                                             cTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGACCGCTGTGCCGTACCGGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttc                                                                           <  1:108499/148‑1 (MQ=255)                                                                 ttCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                         <  4:24101/146‑1 (MQ=255)                                                                                  tCCCACAGGTGCCGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCCACACCCAGCGCTGGTACAGTTCTTCTTTAAGCCCCTGCGGCTg                                                      >  7:111920/1‑148 (MQ=39)                                                                                  tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCGTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                      >  4:154978/1‑148 (MQ=255)                                                                                     caccGGGGCAGCCCAGGTCGCGAACGCTGTGCCGAACCTGTGGGCGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                     <  7:169/146‑1 (MQ=255)                                                                                                 acaGGGCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCTCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCg                                       <  6:182214/148‑1 (MQ=255)                                                                                                     gTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcc                                     >  5:41891/1‑146 (MQ=255)                                                                                                                   gCCGTACCTGTGGGCGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACCAGCGCTGGGAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                       <  3:47050/146‑1 (MQ=255)                                                                                                                     cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcc                   <  3:39036/148‑1 (MQ=255)                                                                                                                     cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                    <  5:92793/147‑1 (MQ=255)                                                                                                                          cTGTGGGAGCGGGCGTGCCCGCGAATGTCAGCAACACTTTTATATGGTTGCCGCCAGCCCCTCCAACAACAAGAGCTTGTAAAGTTCTTCTTTAATCCCCTGAGGCTGCCACAACTGCATCAGCACAAGGTGGCTTTCATACCCATcc              >  8:140463/1‑148 (MQ=255)                                                                                                                                 aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg       <  4:138645/148‑1 (MQ=255)                                                                                                                                      gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATCCCCCTCCGGCCCCGGTGCa  >  1:181450/1‑148 (MQ=255)                                                                                                                                             |                                                                                                                                             CTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCA  >  NC_002947/6013745‑6014025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑