| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,006,824 | Δ1 bp | 5.8% | coding (1052/1791 nt) | PP_3535 ← | gamma‑glutamyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,006,824 | 0 | T | . | 5.8% | 221.4 / 6.4 | 69 | coding (1052/1791 nt) | PP_3535 | gamma‑glutamyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (33/32); new base . (2/2); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCCTTGCGGCTGGCCCGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGCCCAAGGTCTG > NC_002947/4006678‑4006972 | cTCCTTGCGGCTGGCCCGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAg < 8:186797/149‑1 (MQ=255) ttGCGGCTGGCCCGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGc > 7:136935/1‑147 (MQ=255) gCGGCTGGCCCGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCa < 3:303561/147‑1 (MQ=255) ccGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGctcggcc > 5:196732/1‑149 (MQ=255) ggCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGa < 1:137024/149‑1 (MQ=255) gcgcgcTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGAt > 3:146521/1‑149 (MQ=255) cgcgcTTCATGCTGTGCTCGCCGATCAGGGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCTATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATc < 3:338358/149‑1 (MQ=255) cgcgcTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCAGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGGCAGGTACAGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGAt > 4:338358/1‑148 (MQ=255) cTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGTCCGGGACGGGCTCGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGTGATCAGGt < 3:101036/149‑1 (MQ=255) aTGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCAc > 8:360499/1‑149 (MQ=255) gtgCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGcc > 5:368996/1‑148 (MQ=255) tgCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCaa < 2:317630/149‑1 (MQ=255) gcgcGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAAc < 8:216982/146‑1 (MQ=255) tCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAAcgg > 6:343958/1‑149 (MQ=255) gCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAAcggcg > 3:318137/1‑149 (MQ=255) ccGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAAcggcgg < 6:352175/149‑1 (MQ=255) gcgcCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGCCG‑AGGCCGAGCGCCTGGCCTACGCCGATcgc < 2:5970/124‑3 (MQ=25) gcgcCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGCCG‑AGGCCGAGCGCCTGGCCTACGCCGATcgc > 1:5970/1‑122 (MQ=25) gcgcgGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGCCG‑AGGCCGAGCGCCTGGCCTACGCCGATc < 4:280782/117‑1 (MQ=37) gcgcgGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGCCG‑AGGCCGAGCGCCTGGCCTACGCCGATc > 3:280782/1‑117 (MQ=37) cgcgGCTGGCCAGGTAAGCAGAATCGGTCCGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCGCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCgg < 6:257854/149‑1 (MQ=255) cgcgGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCgg < 2:50453/149‑1 (MQ=255) ggCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCa < 8:184951/114‑1 (MQ=255) ggCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCa > 7:184951/1‑114 (MQ=255) gCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCg < 8:136935/149‑1 (MQ=255) gCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCggg < 1:214038/147‑1 (MQ=255) gCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCggg < 7:360499/147‑1 (MQ=255) gCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCggg < 5:343958/147‑1 (MQ=255) gCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGa < 6:368996/149‑1 (MQ=255) ccAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGAc > 3:257796/1‑149 (MQ=255) tAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGt > 3:270900/1‑149 (MQ=255) tAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGt > 3:265922/1‑149 (MQ=255) tCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATAGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCgg > 8:236114/1‑149 (MQ=255) gTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCg > 1:86614/1‑149 (MQ=255) tCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCg > 5:145967/1‑148 (MQ=255) ggCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAgcg < 4:146521/149‑1 (MQ=255) ccTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCt > 2:78390/1‑149 (MQ=255) gACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGc > 3:313126/1‑147 (MQ=255) gACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGc > 7:117290/1‑147 (MQ=255) cGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCgctgc > 6:307810/1‑131 (MQ=255) gggCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGtt < 4:313126/149‑1 (MQ=255) ggCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTg < 6:42609/117‑1 (MQ=255) ggCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTg > 5:42609/1‑117 (MQ=255) cACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCAGTCGCAGCGCTGCCAGGTCGCGTTgcg < 4:257796/149‑1 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCa < 2:227541/130‑1 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTcgc > 1:122931/1‑136 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTcgc < 2:122931/136‑1 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGt > 5:256366/1‑149 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGt < 4:265922/149‑1 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGt < 4:270900/149‑1 (MQ=255) tCGTTGTCGGCCAGGTACTGAGCGCGATCGACGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCa > 1:227541/1‑130 (MQ=255) gTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTgc > 6:235219/1‑149 (MQ=255) ggCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCa < 6:196732/149‑1 (MQ=255) ggTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAgg > 5:36851/1‑77 (MQ=255) ggTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAgg < 6:36851/77‑1 (MQ=255) gTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGt > 3:163959/1‑149 (MQ=255) tACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTc < 1:78390/149‑1 (MQ=255) aGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCa < 7:236114/149‑1 (MQ=255) gcgcGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAg < 2:86614/149‑1 (MQ=255) cgcgATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAgg < 4:318137/149‑1 (MQ=255) cgATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGcc > 1:244344/1‑149 (MQ=255) gATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGcc > 6:235103/1‑148 (MQ=255) aTCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCg < 4:377487/139‑1 (MQ=255) aTCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCg > 4:97006/1‑139 (MQ=255) aTCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCg < 3:97006/139‑1 (MQ=255) aTCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCg > 3:377487/1‑139 (MQ=255) aTCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGccc > 5:38558/1‑148 (MQ=255) cGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGCCCAAg > 6:214890/1‑149 (MQ=255) gCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGCCCAAGGt > 4:188921/1‑149 (MQ=255) tAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGCCCAAGGTCTg < 5:214890/149‑1 (MQ=255) | CTCCTTGCGGCTGGCCCGGACGGGCGCGCTTCATGCTGTGCTCGCCGATCAGCGCCGCGCGGCTGGCCAGGTAAGCAGAATCGGTCAGGGCCTTGACCGGGACGGGCACGTAGTCGTTGTCGGCCAGGTACTGAGCGCGATCGGCGTAGGCCAGGCGCTCGGCCT‑CGGCGATCAGGTGCACGGCCAACGGCGGGGCTTCCAGGCGGGCCGGGGACGAGGTGGCCAGCGGTCGCAGCGCTGCCAGGTCGCGTTGCGGCGCGGTGCGCTGCACGGCGTCGAGCAGGCCCAAGGTCTG > NC_002947/4006678‑4006972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |