| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,463,407 | Δ1 bp | 5.6% | intergenic (‑58/+41) | PP_4799 ← / ← lipA | muramoyltetrapeptide carboxypeptidase/lipoyl synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,463,407 | 0 | C | . | 5.6% | 285.1 / 9.5 | 89 | intergenic (‑58/+41) | PP_4799/lipA | muramoyltetrapeptide carboxypeptidase/lipoyl synthase |
| Reads supporting (aligned to +/- strand): ref base C (42/41); new base . (2/3); total (44/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.68e-01 | |||||||||||
CGCCGCGCCCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAACCTTCC > NC_002947/5463260‑5463550 | cgccgcgccCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGgcgcg < 8:190250/149‑1 (MQ=255) ccgcgccCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCa > 2:160865/1‑149 (MQ=255) gcgccCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATc < 1:160865/149‑1 (MQ=255) cgcccgccGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCg < 2:154397/149‑1 (MQ=255) cgcccgccGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCg < 8:306448/149‑1 (MQ=255) cgcccgccGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCg > 2:136110/1‑149 (MQ=255) cccgccGGGGCGACAATGGCAAACGATGCGTTGGCCGTCAGCGCGGCTGGCAGTGTGGGTTGGAAGGTTTTGGCGCTGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGGCTATGCGCGCCCAAGGGCG‑GCATCGGc < 8:62914/149‑1 (MQ=255) cccgccGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGCG‑GCATCGGc < 5:254041/149‑1 (MQ=255) gccgGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGCG‑GCATCGGc < 4:127534/146‑1 (MQ=255) gccgGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGCG‑GCATCGGc > 3:127534/1‑146 (MQ=255) ggggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCtgt < 3:144785/149‑1 (MQ=255) gggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCtgtg < 4:318709/149‑1 (MQ=255) ggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGcg‑gcatcggcatttttgt < 4:59602/149‑7 (MQ=38) gACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTc < 6:172596/149‑1 (MQ=255) tGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGctc > 7:359939/1‑149 (MQ=255) gCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCAt > 4:257365/1‑127 (MQ=255) gCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCAt < 3:257365/127‑1 (MQ=255) aaaaCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTa < 6:114108/147‑1 (MQ=255) aaaaCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTa > 5:114108/1‑147 (MQ=255) aaaCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGc > 8:179802/1‑149 (MQ=255) aaaCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGc < 5:58681/149‑1 (MQ=255) aaaCATGCGCTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGc < 5:53036/149‑1 (MQ=255) aTGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTaga < 6:143238/149‑1 (MQ=255) aTGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTaga < 2:167262/149‑1 (MQ=255) gCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTagag > 1:277954/1‑148 (MQ=255) cGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCa < 3:80258/149‑1 (MQ=255) gTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCAt < 6:222262/149‑1 (MQ=255) cGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCa < 5:29498/149‑1 (MQ=255) gCATCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGAGCAGTACATCGCGGCTCATTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCaga < 8:206801/149‑1 (MQ=255) cAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGc < 8:135756/111‑1 (MQ=255) cAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGc > 7:135756/1‑111 (MQ=255) cAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCagag < 7:92953/149‑1 (MQ=255) gcgGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCtt > 5:109577/1‑148 (MQ=255) gCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCtgt < 6:364775/106‑1 (MQ=255) gCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCtgt > 5:364775/1‑106 (MQ=255) gCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTg < 2:283211/148‑1 (MQ=255) aGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCAGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCt > 5:23565/1‑149 (MQ=255) tgggtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGt > 3:264222/1‑149 (MQ=255) ggtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTgg < 6:109577/149‑1 (MQ=255) ttGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGc > 1:314576/1‑149 (MQ=255) ttGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGc > 3:373585/1‑149 (MQ=255) gAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCctg > 8:185230/1‑149 (MQ=255) gAAGGTATTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCctg > 4:82699/1‑149 (MQ=255) aaGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCctgc < 7:185230/149‑1 (MQ=255) ggTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCAGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGCCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCctgctg > 3:190162/1‑149 (MQ=255) gcttttGGCGCAGTCCATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCctgctg < 8:335066/147‑1 (MQ=255) gTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTgg > 2:4541/1‑149 (MQ=255) gcAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTg > 8:98253/1‑149 (MQ=255) cAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAg > 6:382210/1‑93 (MQ=255) cAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAg < 5:382210/93‑1 (MQ=255) aGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGt < 1:136110/149‑1 (MQ=255) aGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGt < 4:264222/149‑1 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCg < 1:355351/140‑1 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCg > 2:355351/1‑140 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTa > 3:43369/1‑145 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTa < 4:43369/145‑1 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaa > 6:30447/1‑149 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaa < 8:359939/149‑1 (MQ=255) cgcgGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaag > 6:277157/1‑148 (MQ=255) cgcgGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATAGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaag > 5:162273/1‑148 (MQ=255) gcgGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAAAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaagaa > 6:217960/1‑149 (MQ=255) ggCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACg < 3:82699/149‑1 (MQ=255) tCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTg > 8:41715/1‑134 (MQ=255) tCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTg < 7:41715/134‑1 (MQ=255) tCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCAc > 7:35834/1‑149 (MQ=255) cTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCAc < 5:30447/147‑1 (MQ=255) cAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTGGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCg‑g > 3:15602/1‑149 (MQ=255) aGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCg‑gg < 4:253101/149‑1 (MQ=255) cATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAAAGCACCAGCG‑GGc > 3:111977/1‑146 (MQ=255) acaaacaaAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACg > 2:305969/1‑149 (MQ=255) aaacaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGtt < 7:290588/149‑1 (MQ=255) aaacaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGtt > 2:40237/1‑149 (MQ=255) aacaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTc > 3:260188/1‑149 (MQ=255) acaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCt > 8:80677/1‑149 (MQ=255) acaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCt > 4:99391/1‑149 (MQ=255) caaaAATGCCGATGC‑CGCCGTTGGGCGGGCATGGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCtt < 2:277954/149‑1 (MQ=255) aaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATAGGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTg > 1:303358/1‑148 (MQ=255) aaTGCGGATGC‑CGCCCTTGGGCGCGCATCGTCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCATAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAg < 6:23565/149‑1 (MQ=255) tgccgatgc‑cgCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGcc > 5:349870/1‑149 (MQ=255) gccgatgc‑cgCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGcc > 8:314125/1‑148 (MQ=255) gatgc‑cgCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATc < 5:277157/149‑1 (MQ=255) tgcgcgccCAAGGGCG‑GCATCGGCATCAGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCtt > 3:212674/5‑149 (MQ=255) c‑cgccCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGAGGCCAGAAGCAACGTTCTTGAAGCCCATCtt < 1:40237/148‑1 (MQ=255) c‑cgccCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGt < 7:80677/149‑1 (MQ=255) cgccCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGt > 6:185651/1‑148 (MQ=255) gccCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTaa > 5:323897/1‑149 (MQ=255) ccTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAAcc < 5:185651/149‑1 (MQ=255) cTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCg > 4:353422/1‑89 (MQ=255) cTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCg < 3:353422/89‑1 (MQ=255) ttGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAACCtt > 5:41563/1‑149 (MQ=255) ggCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAACCTTcc < 4:190162/148‑1 (MQ=255) | CGCCGCGCCCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTGTGGCTCCGCTCTAGGCTAGAGCATA‑GCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCG‑GGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAACCTTCC > NC_002947/5463260‑5463550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |