| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,643,062 | Δ1 bp | 5.1% | coding (1233/1386 nt) | dbpA → | 23S rRNA specific ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,643,062 | 0 | T | . | 5.1% | 250.7 / 6.4 | 79 | coding (1233/1386 nt) | dbpA | 23S rRNA specific ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base T (43/32); new base . (2/2); total (45/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
CAGAATAGCCCGCTGCGCTGGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTA > NC_002947/5642916‑5643210 | cAGAATAGCCCGCTGCGCTGGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGAACGGt < 3:256394/147‑1 (MQ=255) aaTAGCCCGCTGCGCTGGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTACATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGTGGCCTTGACCGGTGATGc > 8:46153/1‑149 (MQ=255) gcgctgGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCgg > 5:301622/1‑149 (MQ=255) cgctgGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCg < 1:11271/147‑1 (MQ=255) ggACCAGCTGGACAGCCTGAAACACAAGGGCGGCGAGCCCCTGCTGCCGGGGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGgcaagc < 6:204066/149‑1 (MQ=255) ggACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGgcaagc < 6:209253/149‑1 (MQ=255) ggACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGgcaag > 5:361074/1‑148 (MQ=255) ggACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGG‑GATGCCGGCATCACCGGtcaa < 5:312172/147‑1 (MQ=255) gCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTgg < 6:301622/149‑1 (MQ=255) tGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTggg > 8:333454/1‑148 (MQ=255) gACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGc > 3:233751/1‑147 (MQ=255) cAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGc > 3:237138/1‑145 (MQ=255) ccTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGgcaagc < 2:286052/134‑1 (MQ=255) ccTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGgcaagc > 1:286052/1‑134 (MQ=255) ccTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCg > 5:355885/1‑149 (MQ=255) ccTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCg > 4:190943/1‑149 (MQ=255) cTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGCCCGG‑GATGCCGGCATCACCGGtcaa < 8:301441/131‑1 (MQ=255) cTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGCCCGG‑GATGCCGGCATCACCGGtcaa > 7:301441/1‑131 (MQ=255) tGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGc > 4:173149/1‑148 (MQ=255) tGAAAAACAAGGGCGGCGAGCCCCTGCGGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCCTC‑CCGGGCAAGCAAGTGGGCAAGATCGc > 8:10962/1‑148 (MQ=255) gAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCa > 4:237554/1‑149 (MQ=255) aaaCAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCt > 6:216290/1‑149 (MQ=255) aaaCAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCt > 2:296192/1‑149 (MQ=255) aaGGGCGGCGAGCCCCTGCTGCCGGTGATGACCACGACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTCCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑Tc > 1:56728/1‑148 (MQ=255) gcggcgAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTc < 3:237554/149‑1 (MQ=255) gcggcgAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTACATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTc < 7:46153/149‑1 (MQ=255) cggcgAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCa > 5:64253/1‑128 (MQ=255) cggcgAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCa < 6:64253/128‑1 (MQ=255) ggcgAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCa < 7:333454/149‑1 (MQ=255) ccGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGcc < 8:208719/147‑1 (MQ=255) ccGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGt < 6:355885/149‑1 (MQ=255) ccGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGt < 3:190943/149‑1 (MQ=255) cGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTg > 2:247117/1‑149 (MQ=255) gTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGa < 1:296192/149‑1 (MQ=255) gaCCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCggg > 1:165313/1‑149 (MQ=255) cac‑aCTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGgcgc > 2:330042/1‑149 (MQ=255) cac‑aCTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCAGC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTGTGTGGGAGTGGAGACGgcgc > 4:289987/1‑149 (MQ=255) acTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTgg < 2:165313/149‑1 (MQ=255) gCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCAGC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑GCGACTTCCAGGCGTGTGGGGCCGTGGAGCGGGCGCTGGCCCAg > 7:241057/1‑149 (MQ=255) aTTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGCTGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCa < 7:10962/149‑1 (MQ=255) aTTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAg > 4:121172/1‑147 (MQ=255) gCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAgg < 4:237138/148‑1 (MQ=255) ccGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTg < 7:100350/137‑1 (MQ=255) ccGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTg > 8:100350/1‑137 (MQ=255) ccGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGc > 1:191055/1‑148 (MQ=255) cTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCTACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATg < 4:233751/149‑1 (MQ=255) cGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCg > 6:194255/1‑149 (MQ=255) ggACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCTCTCGACTTCCAGGCGTTTGTGGCCGTGGAGCggg < 1:50794/120‑1 (MQ=255) ggACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCggg > 2:50794/1‑119 (MQ=255) ggACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTg > 5:222347/1‑148 (MQ=255) aCAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGaa > 7:34087/1‑148 (MQ=255) aCAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAAc < 6:116410/149‑1 (MQ=255) aaGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAg > 1:326861/1‑149 (MQ=255) aaGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAg > 5:244181/1‑149 (MQ=255) gCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCg < 8:34087/149‑1 (MQ=255) gCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCg > 8:93374/1‑149 (MQ=255) gCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCg < 2:326861/149‑1 (MQ=255) gcgcCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGc > 1:3118/1‑148 (MQ=255) cgcCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCaa < 2:56728/149‑1 (MQ=255) ccTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGAt < 1:330042/149‑1 (MQ=255) tGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATc > 2:275952/1‑148 (MQ=255) ggCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCt < 1:235474/131‑1 (MQ=255) ggCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCt > 2:235474/1‑131 (MQ=255) gCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTg > 5:266159/1‑131 (MQ=255) gCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTg < 6:266159/131‑1 (MQ=255) gCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAg > 3:21195/1‑149 (MQ=255) gCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAg < 7:93374/149‑1 (MQ=255) cGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAgg < 5:194255/149‑1 (MQ=255) cATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTc < 3:289987/149‑1 (MQ=255) aTCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCGGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTcg > 4:216772/1‑149 (MQ=255) aTCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTcg > 1:157520/1‑149 (MQ=255) tCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTcgc > 5:11589/1‑149 (MQ=255) tGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGcc > 5:386631/1‑149 (MQ=255) gggggCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGccc > 2:279848/1‑149 (MQ=255) gggggCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGccc > 2:22625/1‑149 (MQ=255) gcTTGCCCGG‑GATGCCGGCATCACCGGTCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGa > 4:80160/2‑147 (MQ=255) cTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTcg > 2:357749/1‑138 (MQ=255) cTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTcg < 1:357749/138‑1 (MQ=255) gACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGATCGCGCCCTGAAAGt < 3:121172/147‑1 (MQ=255) ccGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGc < 6:361074/149‑1 (MQ=255) tGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTa > 1:211111/1‑149 (MQ=255) | CAGAATAGCCCGCTGCGCTGGGACCAGCTGGACAGCCTGAAAAACAAGGGCGGCGAGCCCCTGCTGCCGGTGATGACCAC‑ACTGTGCATTGCCGCTGGCCGCAAGGACAAGCTGCGCCCTGGCGACATCCTGGGGGCCTTGACCGGTGATGCCGGCATC‑CCGGGCAAGCAAGTGGGCAAGATCGCCATCT‑TCGACTTCCAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTA > NC_002947/5642916‑5643210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |