| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 92152 = | 71 (1.200) | 4 (0.070) | 4/242 | NT | 6.1% | coding (228/810 nt) | trpA | tryptophan synthase subunit alpha |
| ? | NC_002947 | 92185 = | 55 (0.980) | coding (195/810 nt) | trpA | tryptophan synthase subunit alpha | |||||
GCGACCCGGGCTACGACGCCTCGTTGCAGATCCTCAAGGGCCTGCCGGCTGCTGGCGCCGACGTGATCGAGCTGGGCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/92303‑92152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAAGGTGACCAGTGCCGAG > NC_002947/92185‑92332 GCGACCCGGGCTACGACTCCTCGTTGCAGATCCTCAAGGGCCTGCCGGCTGCTGGCGCCGACGTGATCGAGCTGGTCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGG < 2:303027/148‑1GCGACCCGGGCTACGACGCCTCGTTGCAGATCCTCAAGGGCCTGCCGGCTGCTGGCGCCGACGTGATCGAGCTGGGCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTG < 3:141750/147‑1 TGCTGGCGCCGACGTGATCGAGCTGGGCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGGC > 1:190260/1‑100 TGCTGGCGCCGACGTGATCGAGCTGGGCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGGC < 2:190260/100‑1 ATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGC > 4:309584/1‑149 GCTGGCCACCCTGCGCGCCCTTGAAGCTGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCA < 5:119718/111‑1 GCTGGCCACCCTGCGCGCCCTTGAAGCTGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCA > 6:119718/1‑111 CCCTTGAAGCTGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAA < 3:309584/149‑1 TGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTG < 1:225967/100‑1 TGGCCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTG > 2:225967/1‑100 CCAGCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAAGGTGACCAGTGCC > 3:283627/1‑149 GCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAAGGTGACCAGTGCCGAG < 2:361748/149‑1 GCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAAGGTGACCAGTGCCGAG < 4:283627/149‑1 GCGACCCGGGCTACGACGCCTCGTTGCAGATCCTCAAGGGCCTGCCGGCTGCTGGCGCCGACGTGATCGAGCTGGGCATGCCGTTCACCGACCCGATGGCCGATGGCGTGGCCATCCAGCTGGCCACCCTGCGCGCCCTTGAAGCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/92303‑92152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagCTGGATGGCCACGCCATCGGCCATCGGGTCGGTGAACGGCATGCCCAGCTCGATCACGTCGGCGCCAGCAGCCGGCAGGCCCTTGAGGATCTGCAACGAGGCGTCGTAGCCCGGGTCGCCAGCTGTGACGAAGGTGACCAGTGCCGAG > NC_002947/92185‑92332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |