New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 252712	71 (1.200)	4 (0.070)	4/248	NT	5.9%	coding (580/639 nt)	PP_5433	hypothetical protein
	?	NC_002947	= 252763	58 (1.010)					coding (631/639 nt)	PP_5433	hypothetical protein

ACTGGCTGGCCAACGCTCGCGACCTGTCCAGCGTGGCCCAGGCGATGGCCCGCGAACGCTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/252563‑252712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtAGGCGCGCTCCAGCTCGTCCAGCTGATGGTCGAAGCTACGCAAGCGCGCCGACCAGGT  <  NC_002947/252763‑252706                                                                                                                                                                                                                  ACTGGCTGGCCAACGCTCGCGACCTGTCCAGCGTGGCCCAGGCGATGGCCCGCGAACGCTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGG                                                             >  7:235506/1‑149                             CAGCGTGGCCCAGGCGATGGCCCGCGAACGCTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGTAGGCGCGCTCCAGCTCGTCCAGCTGAT                                 >  4:59341/1‑149                                                          GCTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGTAGGCGCGCTCCAGCTCGTCCAGCTGATGGTCGAAGCTACGCAAGCGCGCCGACCAG    <  3:59341/149‑1                                                           CTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGTAGGCGCGCTCCAGCTCGTCCAGCTGATGGTCGAAGCTACGCAAGCGCGCCGACCAGG   <  8:251033/149‑1                                                              CCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGTAGGCGCGCTCCAGCTCGTCCAGCTGATGGTCGAAGCTACGCAAGCGCGCCGACCAGGT  <  1:53089/147‑1                                                                                                                                                                                                                  ACTGGCTGGCCAACGCTCGCGACCTGTCCAGCGTGGCCCAGGCGATGGCCCGCGAACGCTACCAGCTGGACCTCGGCGAGCCCACGCACAGCGGCCACGGCAATACGGCAGTGCTCAACCGTGACCTGGAAGTGCTGGTGTACACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/252563‑252712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtAGGCGCGCTCCAGCTCGTCCAGCTGATGGTCGAAGCTACGCAAGCGCGCCGACCAGGT  <  NC_002947/252763‑252706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.