| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 346217 = | 67 (1.130) | 4 (0.070) | 4/246 | NT | 6.2% | coding (1629/2247 nt) | PP_0287 | hypothetical protein |
| ? | NC_002947 | 346248 = | 57 (1.000) | coding (1598/2247 nt) | PP_0287 | hypothetical protein | |||||
CGCGGAGAGCTGTACAACGGCACCTTCGAAGCCAAGGGCACGGTCGACGTGCGCCCTGCCGTGCCACAGCTGGGTGTGAACACCAATATCCAGCGGGTGCCGGTGGAACACTTCATCAAGACCGAAGGCAAGGAACAGACGCCGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/346366‑346217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGACCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAGCTCTCCGCGCAGGGTTTGCA > NC_002947/346248‑346377 CGCGGAGAGCTGTACAACGGCACCTTCGAAGCCAAGGGCACGGTCGACGTGCGCCCTGCCGTGCCACAGCTGGGTGTGAACACCAATATCCAGCGGGTGCCGGTGGAACACTTCATCAAGACCGAAGGCAAGGAACAGACGCCGCCGGT > 8:193973/1‑149CGCGGAGAGCTGTACAACGGCACCTTCGAAGCCAAGGGCACGGTCGACGTGCGCCCTGCCGTGCCACAGCTGGGTGTCAACACCAATATCCAGCGGGTGCGGGTGTAACACTTCATCAAGACCGAAGGCAAGGAACAGACGCCGCCGGT < 3:192457/149‑1 CATCAAGACCGAAGGCAAGGAACAGACGCCGCCGGTCTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGACCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAGCT > 7:147404/1‑149 CAAGACCGAAGGCAAGGAACAGACGCCGCCGGTCTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGTCCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAG < 1:50210/144‑1 CAAGACCGAAGGCAAGGAACAGACGCCGCCGGTCTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGACCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAG > 2:50210/1‑144 GGAACAGACGCCGCCGGTCTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGACCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAGCTCTCCGCGCAGGGTTTGCA < 8:147404/149‑1 CGCGGAGAGCTGTACAACGGCACCTTCGAAGCCAAGGGCACGGTCGACGTGCGCCCTGCCGTGCCACAGCTGGGTGTGAACACCAATATCCAGCGGGTGCCGGTGGAACACTTCATCAAGACCGAAGGCAAGGAACAGACGCCGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/346366‑346217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcTTGATGAAGTGTTCCACCGGCACCCGCTGGATATTGGTGTTCACACCCAGCTGTGGCACGGCAGGGCGCACGTCGACCGTGCCCTTGGCTTCGAAGGTGCCGTTGTACAGCTCTCCGCGCAGGGTTTGCA > NC_002947/346248‑346377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |