New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 363842	50 (0.850)	4 (0.070)	4/240	NT	7.5%	coding (692/885 nt)	PP_0303	dehydrocarnitine cleavage enzyme
	?	NC_002947	= 363902	52 (0.940)					coding (632/885 nt)	PP_0303	dehydrocarnitine cleavage enzyme

CGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/363688‑363842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatggTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCGCAGGCCGTGTTGCTCGGCGGCAATGTGCGG  <  NC_002947/363902‑363802                                                                                                                                                                                                                                                                  CGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGG                                                                                                             >  8:190338/1‑149     CTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCAT                                                                                                         >  8:32332/1‑149                                                GTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCCGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGG                                                                                                             >  5:273199/1‑102                                                GTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGG                                                                                                             <  6:273199/102‑1                                                                                                AGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCC                                   >  5:68252/1‑128                                                                                                AGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCC                                   <  6:68252/128‑1                                                                                                                   CCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCG                                <  1:38603/112‑1                                                                                                                   CCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCG                                >  2:38603/1‑112                                                                                                                                                          GGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCGCAGGCCGTGTTGCTCGGCGGCAATGTGCGG  >  7:288373/1‑103                                                                                                                                                          GGTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCGCAGGCCGTGTTGCTCGGCGGCAATGTGCGG  <  8:288373/103‑1                                                                                                                                                           GTCGACAACCTGCCTCCCACCGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCGCAGGCCGTGTTGCTCGGCG             <  7:193694/91‑1                                                                                                                                                                                                                                                                  CGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCCACGGTCCAGATACAAGTTGTCTTCCAGGCCCACCCGCACATTGCCGCCGAGCAACACGGCCTGCGCGGCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/363688‑363842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatggTCGACAACCTGCCTGCCAACGTCACCTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCCATGGCCGCGCAGGCCGTGTTGCTCGGCGGCAATGTGCGG  <  NC_002947/363902‑363802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.