New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 419628	55 (0.930)	3 (0.050)	3/244	NT	5.1%	coding (680/753 nt)	PP_0346	heptose kinase WapQ
	?	NC_002947	= 419654	59 (1.050)					coding (706/753 nt)	PP_0346	heptose kinase WapQ

GTTGGGACGCGCAATTGATCGACCTGGAAAAGACCCGGCCGCTGCTGTTCGGCATGCGTGACCGCCTCAAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/419475‑419628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCCCAGGTAGGTAGCCAGCAAAGTACGTACATCCTGCACGCGCCAGGCCTGCGCGCGGCGCAGCAGCGGTTCCAGGTCCTTGAGGCGGTCACGCATGCCGAACAGCAGCGGCCGGGT  <  NC_002947/419654‑419507                                                                                                                                                                                                                                                                                                                GTTGGGACGCGCAATTGATCGACCTGGAAAAGACCCGGCCGCTGCTGTTCGGCATGCGTGACCGCCTCAAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGG                                                                                                                                                           >  3:87349/1‑149                                             CTGTTCGGCATGCGTGACCGCCTCCAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGGCAGCCAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCCCAG                                                                                                                 <  3:211936/147‑1                                              TGTTCGGCATGCGTGACCGCCTCAAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGGCAGCCAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCC                                                                                                                    >  7:140866/1‑143                                              TGTTCGGCATGCGTGACCGCCTCAAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGGCAGCCAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCC                                                                                                                    <  8:140866/143‑1                                                                                                                                                          CAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCCCAGGTAGGTAGCCAGCAAAGTACGTACATCCTGCACGCGCCAGGCCTGCGCGCGGCGCAGCAGCGGTTCCAGGTCCTTGAGGCGGTCACGCATGCCGAACAGCAGCGGCCGGGT  <  5:117347/149‑1                                                                                                                                                                                                                                                                                                                GTTGGGACGCGCAATTGATCGACCTGGAAAAGACCCGGCCGCTGCTGTTCGGCATGCGTGACCGCCTCAAGGACCTGGAACCGCTGCTGCGCCGCGCGCAGGCCTGGCGCGTGCAGGATGTACGTACTTTGCTGGCTACCTACCTGGGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/419475‑419628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccAGGTGTCGACCAGCGCGCCGTCAGCCGGCTGCCCCAGGTAGGTAGCCAGCAAAGTACGTACATCCTGCACGCGCCAGGCCTGCGCGCGGCGCAGCAGCGGTTCCAGGTCCTTGAGGCGGTCACGCATGCCGAACAGCAGCGGCCGGGT  <  NC_002947/419654‑419507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.