New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 464840 | 52 (0.880) | 3 (0.050) | 3/244 | NT | 5.6% | coding (257/1683 nt) | davB | lysine 2‑monooxygenase |
? | NC_002947 | = 464867 | 51 (0.910) | coding (230/1683 nt) | davB | lysine 2‑monooxygenase |
ATCACCGTGCTGCCCGAAGCCGGGGTCAGCGGGTTGGGGAAGGGCTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/464687‑464840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAATGGCACTGACGGGATCGTTGCCGAGCTGGGTGGCATGCGCTTCCCGGTGTCGTCCACCGCCTTCTACCACTACGTCGACAAGCTGGGCCTGGAGACCAAGCCCTTCC < NC_002947/464867‑464724 ATCACCGTGCTGCCCGAAGCCGGGGTCAGCGGGTTGGGGAAGGGCTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAA < 4:231949/149‑1 TCACCGTGCTGCCCGAAGCCGGGGTCAGCGGGTTGGGGAAGGGCTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAG < 1:193000/149‑1 CGTGCTGCCCGAAGCCGGGGTCAGCGGGTTGGGGAAGGGCTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTT > 2:58140/1‑149 CTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTTCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAATG < 7:210665/149‑1 TCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGCCACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTTCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAAT > 8:340685/1‑141 TCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTTCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAAT < 7:340685/141‑1 AGGCTTCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAATGGCACTGACGGGATCGTTGCCGAGCTGGGTGGCATGCGCTTCCCGGTGTCGTCCACCGCCTTCTACCACTACGTCGACAAGCTGGGCCTGGAGACCAAGCCCTTC > 7:82856/1‑149 GGCGTCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAATGGCACTGACGGGATCGTTGCCGAGCTGGGTGGCATGCGCTTCCCGGTGTCGTCCACCGCCTTCTACCACTACGTCGACAAGCTGGGCCTGGAGACCAAGCCCTTCC < 6:303955/149‑1 ATCACCGTGCTGCCCGAAGCCGGGGTCAGCGGGTTGGGGAAGGGCTTGGTCTCCAGGCCCAGCTTGTCGACGTAGTGGTAGAAGGCGGTGGACGACACCGGGAAGCGCATGCCACCCAGCTCGGCAACGATCCCGTCAGTGCCATTGAAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/464687‑464840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttCCAAGCTGGGCGGCCGGCTGCGCTCGCAAGCCTTCAATGGCACTGACGGGATCGTTGCCGAGCTGGGTGGCATGCGCTTCCCGGTGTCGTCCACCGCCTTCTACCACTACGTCGACAAGCTGGGCCTGGAGACCAAGCCCTTCC < NC_002947/464867‑464724 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |