New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	571804 =	64 (1.080)	4 (0.070)	4/250	NT	5.8%	coding (1286/1425 nt)	PP_0486	GntR family transcriptional regulator
	?	NC_002947	571842 =	68 (1.180)					coding (1248/1425 nt)	PP_0486	GntR family transcriptional regulator

CCTGGCGCGTGACAACGGCGTAACGGTGGTCAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/571842‑571804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTGGCCAAGAATCTCCCGGGCCATGTGCTGGCGCGCGGCCGCCTCCTGCTGCTGCATACGCACCAAC  >  NC_002947/571842‑571989                                                                                                                                                                                             CCTGGCGCGTGACAACGGCGTAACGGTGGTCAGCGGCAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTGGCCAAGAATCTCCCGGGCCATGTGCT                                        >  2:32752/1‑149  CTGGCGCGTGACAACGGCGTAACGGTGGTCAGCGGCAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTG                                                                  >  1:371249/1‑122  CTGGCGCGTGACAACGGCGTAACGGTGGTCAGCGGCAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTG                                                                  <  2:371249/122‑1                           TGGTCAGCGGCAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTGGCCAAGAATCTCCCGGGCCATGTGCTGGCGCGCGGCCGCCTCCTGCTGCTGC              <  1:32752/149‑1                                     CAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGG                                                                             <  1:22156/76‑1                                     CAGGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGG                                                                             >  2:22156/1‑76                                       GGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTGGCCAAGAATCTCCCGGGCCATGTGCTGGCGCGCGGCCGCCTCCTGCTGCTGCATACGCACCAAC  <  7:63169/149‑1                                                                                                                                                                                             CCTGGCGCGTGACAACGGCGTAACGGTGGTCAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/571842‑571804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGTTGGCAAACTCGTCGCTGGTCCACGGTTCTGGCAGCTCCAGCCAGATATGGAAGCTGTGGGGCTGACTGCGGATCTTGTATTGGCCAAGAATCTCCCGGGCCATGTGCTGGCGCGCGGCCGCCTCCTGCTGCTGCATACGCACCAAC  >  NC_002947/571842‑571989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.