| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 623511 = | 67 (1.130) | 5 (0.090) | 5/246 | NT | 7.3% | coding (170/471 nt) | PP_0536 | hypothetical protein |
| ? | NC_002947 | 623532 = | 63 (1.110) | coding (149/471 nt) | PP_0536 | hypothetical protein | |||||
AGCTGCACGCCTATCATCATGAGGTGGCTACCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGATGCAGAGCGGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/623661‑623511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaTGCAAGGCTTCCAGTTGCTTAAACAACAGCTTGCAGTCATCGGCACCCGCAGAGCCGTGTCTTATCCTCTCCAGTAATTCTTTGATCTGAGTAATTTTGGTAGCCACCTCATGATGATAGGCGTGCAGCTCTTTCAATAAGGCGT > NC_002947/623532‑623676 AGCTGCACGCCTATCATCATGAGGTGGCTACCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGATGCAGAGCGGCAC < 8:11372/149‑1 CTGCACGCCTATCATCATGAGGTGGCTACCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGATGCAGAGCGGCACCA < 2:213277/149‑1 TCATGAGGTGGCTACCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGCCGCTCTGCATCACCATGCAAGGCTTCCAG > 1:34630/1‑149 CCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGCCGCTCTGCATCACCATGCAAGGCTTCCAGTTGCTTAAACAACA < 2:34630/149‑1 CTTGCATGGTGATGCAGAGCGGCACCATGCAAGGCTTCCAGTTGCTTAAACAACAGCTTGCAGTCATCGGCACCCGCAGAGCCGTGTCTTATCCTCTC > 3:278142/1‑98 CTTGCATGGTGATGCAGAGCGGCACCATGCAAGGCTTCCAGTTGCTTAAACAACAGCTTGCAGTCATCGGCACCCGCAGAGCCGTGTCTTATCCTCTC < 4:278142/98‑1 GCATGGTGATGCAGAGCGGCACCATGCAAGGCTTCCAGTTGCTTAAACAACAGATTGCAGTCATCGGCACCAGCAGAGCCGTGTCTTATACTCTCCAGTAATTATTTGATATGAGTAATTTTTGTAGCCACCTCATGATGATAGGAGTG > 6:236125/1‑149 ACCATGCAAGGCTTCCAGTTGCTTAAACAACAGCTTGCAGTCATCGGCACCCGCAGAGCCGTGTCTTATCCTCTCCAGTAATTCTTTGATCTGAGTAATTTTGGTAGCCACCTCATGATGATAGGCGTGCAGCTCTTTCAATAAGGCGT < 3:67085/149‑1 AGCTGCACGCCTATCATCATGAGGTGGCTACCAAAATTACTCAGATCAAAGAATTACTGGAGAGGATAAGACACGGCTCTGCGGGTGCCGATGACTGCAAGCTGTTGTTTAAGCAACTGGAAGCCTTGCATGGTGATGCAGAGCGGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/623661‑623511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaTGCAAGGCTTCCAGTTGCTTAAACAACAGCTTGCAGTCATCGGCACCCGCAGAGCCGTGTCTTATCCTCTCCAGTAATTCTTTGATCTGAGTAATTTTGGTAGCCACCTCATGATGATAGGCGTGCAGCTCTTTCAATAAGGCGT > NC_002947/623532‑623676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |