New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	637804 =	64 (1.080)	5 (0.090)	4/240	NT	7.5%	coding (56/288 nt)	PP_0549	lipoprotein
	?	NC_002947	637842 =	64 (1.160)					coding (94/288 nt)	PP_0549	lipoprotein

ATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/637957‑637804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccgGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGT  >  NC_002947/637842‑637986                                                                                                                                                                                                                                                                                                             ATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCG                                                                                                                                                        >  1:141378/1‑149    CTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCAC                                                                                                                                                     >  7:52656/1‑149       CCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCG                                                                                                                                                   <  6:24230/148‑1       CCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACC                                                                                                                                                    <  2:77596/147‑1                                                                                                                 CCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGA                                              <  5:9862/143‑1                                                                                                                 CCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGA                                              >  6:9862/1‑143                                                                                                                    CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGC                                                             <  1:175647/125‑1                                                                                                                    CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGC                                                             >  2:175647/1‑125                                                                                                                    CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCAGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGG                                     >  1:95125/1‑149                                                                                                                                                   GCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCG      <  1:28637/149‑1                                                                                                                                                       ACCGGTGGTGTATGCCGGTACCCGGCAGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGT  <  5:6100/149‑1                                                                                                                                                                                                                                                                                                             ATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/637957‑637804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccgGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGT  >  NC_002947/637842‑637986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.