New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	643874 =	53 (0.900)	3 (0.050)	3/248	NT	5.9%	coding (132/1023 nt)	acoB	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta
	?	NC_002947	643922 =	45 (0.790)					coding (84/1023 nt)	acoB	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta

TTCATCATTGGCGAAGACGTCGCCGGCGGTGCCGGTGCGCCCGGCGAGGATGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/643930‑643874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAATGATGAATACTGTGCTGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGATGGCCTGCTGGTAGCTGATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTG  >  NC_002947/643922‑644066                                                                                                                                                                                                            TTCATCATTGGCGAAGACGTCGCCGGCGGTGCCGGTGCGCCCGGCGAGGATGACGCCAATGATGAATACTGTGCTGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGATGGCCTGCTGGTAGCTGATCTTTCTTGCCATGGTGGTTC                                                       >  4:191414/1‑149        TTGGCGAAGACGTCGCCGGCGGTGCCGGTGCGCCCGGCGAGGATGACGCCAATGATGAATACTGTGCTGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGATGGCCTGCTGGTAGCTGATCTTTCTTGCCATGGTGGTTCTCCTGTT                                                <  3:191414/149‑1           GCGAAGACGTCGCCGGCGGTGCCGGTGCGCCCGGCGAGGATGACGCCAATGATGAATACTGTGCTGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGATGGCCTGCTGGTAGCTGATCGTTCTTGCCATGGTGGTTCTCCTGTTGTT                                             >  3:94279/1‑149                                                       GCCAATGATGAATACTGTGCGGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGAGGGCCTGCTGGTAGCTGATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTG  <  1:313043/148‑1                                                                                                                                                                                                            TTCATCATTGGCGAAGACGTCGCCGGCGGTGCCGGTGCGCCCGGCGAGGATGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/643930‑643874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAATGATGAATACTGTGCTGTCGCGGCGCATTTCCTGGGCCAGGGCCTCGTTGATGGCCTGCTGGTAGCTGATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTG  >  NC_002947/643922‑644066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.