| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 754612 | 66 (1.120) | 4 (0.070) | 4/244 | NT | 5.8% | coding (133/183 nt) | PP_0643 | hypothetical protein |
| ? | NC_002947 | = 754638 | 68 (1.210) | coding (107/183 nt) | PP_0643 | hypothetical protein | |||||
TCGGCGGTCGGCACCGTCGCAATGAACCTGGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/754459‑754612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccgCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATACCGGCCAGGCTTGTGCCAGCGGATCAG < NC_002947/754638‑754492 ttGGCGGTCGGCACCGTCGCAATGAACCTGGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAA < 5:33880/147‑1 GGCGGTCGGCACCGTCGCATTGAACCTGGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGGGCAACAATCCAAAA < 3:113287/149‑1 GCGGTCGGCACCGTCGCAATGAACCTGGTGCTGATCCGCTGCCACAAGCCTGGCCGGTATCGAGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAAC < 5:328748/149‑1 GCGGTCGGCACCGTCGCAATGAACCTAGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAAC > 6:101928/1‑149 CCTGGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCGCGCGCCGGCTGCTGCCGCTG > 6:367306/1‑148 GCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGG < 5:367306/149‑1 CTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTT < 3:269968/102‑1 CTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTT > 4:269968/1‑102 AACCGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATACCGGCCAGGCTTGTGCCAGCGGAT < 3:8434/149‑1 CGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATACCGGCCAGGCTTGTGCCAGCGGATCAG < 8:214947/149‑1 CGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATAC < 3:82302/123‑1 CGCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATAC > 4:82302/1‑123 TCGGCGGTCGGCACCGTCGCAATGAACCTGGTGCTGATCCGCTGGCACAAGCCTGGCCGGTATCGGGGCTGATTTGAATGTGATGCTGGGCACCGCCTGGAACTCAGATTTTCCGGGGCCTGGCGGTCATGGCCCGTGCAACAATCCAAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/754459‑754612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccgCGCGCCGGCTGCTGCCGCTGCACGTTCGGTTTTGGATTGTTGCACGGGCCATGACCGCCAGGCCCCGGAAAATCTGAGTTCCAGGCGGTGCCCAGCATCACATTCAAATCAGCCCCGATACCGGCCAGGCTTGTGCCAGCGGATCAG < NC_002947/754638‑754492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |