New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 785539	50 (0.850)	4 (0.070)	3/244	NT	7.2%	coding (387/3831 nt)	PP_0672	sensory box protein
	?	NC_002947	= 785639	55 (0.980)					coding (287/3831 nt)	PP_0672	sensory box protein

ACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAGCAACAGGTACAGGAGGTGGTTGTCGGCCGAATTGGTGAAGAAGTACGGGCGTCCCTGGCTCAGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/785388‑785539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAGCCCCGACCGCCAGTCACTTGACGAGTTGCTCGTGCTGAGC  <  NC_002947/785639‑785494                                                                                                                                                                                                                                                                                                            ACAGGCGCGGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAGCAACAGGTACAGGAGGTGGTTGTCGGCCGAATTGGTGAAGAAGTACGGGCGTCCCTGGCTCAGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTG                                                                                                                                                       <  3:205017/149‑1   AGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAGCAACAGGTACAGGAGGTGGTTGTCGGCCGAATTGGTGAAGAAGTACGGGCGTCCCTGGCTCAGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCC                                                                                                                                                     >  1:22004/1‑149                                                    ACAGGTACAGGAGGTGGTTGTCGGCCGAATTGGTGAAGAAGTACGGGCGTCCCTGGCTCAGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTG                                                                                                     >  3:361552/1‑148                                                                                                               AGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAG                                          <  4:361552/148‑1                                                                                                               AGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCA                                           <  4:339213/147‑1                                                                                                               AGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCA                                           <  5:228403/147‑1                                                                                                                                                   CTGCCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAGCCCCGACCGCCAGTCACTTGACGAGTTGCTCGTGCT      >  4:361898/1‑148                                                                                                                                                      CCGCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAGCCCCGACCGCCAGTCACTTGACGAGTTGCTCGTGCTGAGC  <  3:361898/149‑1                                                                                                                                                                                                                                                                                                            ACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAGCAACAGGTACAGGAGGTGGTTGTCGGCCGAATTGGTGAAGAAGTACGGGCGTCCCTGGCTCAGCACGAGCAACTCGTCAAGTGACTGGCGGTCGGGGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/785388‑785539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgCCCTGCCCAGCCTGCTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAGCCCCGACCGCCAGTCACTTGACGAGTTGCTCGTGCTGAGC  <  NC_002947/785639‑785494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.