| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 808489 = | 62 (1.050) | 3 (0.050) | 3/246 | NT | 5.1% | coding (869/1335 nt) | PP_0695 | hypothetical protein |
| ? | NC_002947 | 808534 = | 53 (0.930) | coding (824/1335 nt) | PP_0695 | hypothetical protein | |||||
CGCCCAGTTGACCCTGCGCCACGCCCGCGAACTGCTGCTGCCGCTGCGCGAAGAAGCCCGCCGACACAACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/808602‑808489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGGTCAACTGGGCGCTGGTCTGCATTTCCAGGATGCGCGCGTGGGTGCGCAGCAGCATGTCGTCGTCGACCAGGTGGCCCAGGCGCGC > NC_002947/808534‑808676 CGCCCAGTTGACCCTGCGCCACGCCCGCGAACTGCTGCTGCCGCTGCGCGAAGAAGCCCGCCGACACAACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGC > 5:142858/1‑113CGCCCAGTTGACCCTGCGCCACGCCCGCGAACTGCTGCTGCCGCTGCGCGAAGAAGCCCGCCGACACAACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGC < 6:142858/113‑1 ACAACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGCGTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGGTCAACTGGGCGCTGGTCTGCATTTCCAGGATGCGCGCGTGGG > 5:33767/1‑149 AACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGCGTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGATCAACTGGGCGCTGGTCTGCATTTCCAGGATGCGCGCGTGG > 7:302122/1‑146 AACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGCGTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGATCAACTGGGCGCTGGTCTGCATTTCCAGGATGCGCGCGTGG < 8:302122/146‑1 CGGCGTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGGTCAACTGGGCGCGGGTCTGCATTTCCAGGATGCGCGCGTGGGTGCGCAGCAGCATGTCGTCGTCGACCAGGTGGCCCAGGCGCGC < 6:33767/148‑1 CGCCCAGTTGACCCTGCGCCACGCCCGCGAACTGCTGCTGCCGCTGCGCGAAGAAGCCCGCCGACACAACGCCGTGACCCGCGGCGCCGCACTGGCCCTGTCGGTGATCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/808602‑808489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTGTGTCGGCGGGCTTCTTCGCGCAGCGGCAGCAGCAGTTCGCGGGCGTGGCGCAGGGTCAACTGGGCGCTGGTCTGCATTTCCAGGATGCGCGCGTGGGTGCGCAGCAGCATGTCGTCGTCGACCAGGTGGCCCAGGCGCGC > NC_002947/808534‑808676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |