New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	877664 =	80 (1.350)	5 (0.090)	4/244	NT	5.8%	coding (515/966 nt)	hprA	glycerate dehydrogenase
	?	NC_002947	877716 =	85 (1.510)					coding (463/966 nt)	hprA	glycerate dehydrogenase

TGCGACTACAACCAGGCGGTGGCCGATGGCCAGTGGGCCAAGGCCAGCCAGTTCTGCCTGCTGGACTTTCCTATCGTCGAGCTGGAGGGCAAAACCCTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/877812‑877664 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTAC  >  NC_002947/877716‑877860                                                                                                                                                                                                                                                                                                        TGCGACTACAACCAGGCGGTGGCCGATGGCCAGTGGGCCAAGGCCAGCCAGTTCTGCCTGCTGGACTTTCCTATCGTCGAGCTGGAGGGCAAAACCCTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCC                                                                                                                                                     <  6:32197/147‑1                                                                                        GGCAAAACCCTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGC                                                                                                                                                      >  1:80965/1‑59                                                                                        GGCAAAACCCTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGC                                                                                                                                                      <  2:80965/59‑1                                                                                                 CTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCG                                                    >  7:352252/1‑148                                                                                                  TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCA                                                  >  6:87059/1‑149                                                                                                                CACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGC                                      >  2:74382/1‑147                                                                                                                                    AGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGG                <  1:74382/149‑1                                                                                                                                    AGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGG                <  8:352252/149‑1                                                                                                                                                 gaCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCAACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTA   >  3:364352/3‑149                                                                                                                                                  CCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTAC  <  3:56314/149‑1                                                                                                                                                  CCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTA   >  4:56314/1‑148                                                                                                                                                  CCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTA   >  6:44553/1‑148                                                                                                                                                  CCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGG       >  7:246585/1‑144                                                                                                                                                  CCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGG       <  8:246585/144‑1                                                                                                                                                    GAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAG                                                       <  5:386700/94‑1                                                                                                                                                    GAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAG                                                       >  6:386700/1‑94                                                                                                                                                                                                                                                                                                        TGCGACTACAACCAGGCGGTGGCCGATGGCCAGTGGGCCAAGGCCAGCCAGTTCTGCCTGCTGGACTTTCCTATCGTCGAGCTGGAGGGCAAAACCCTCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/877812‑877664 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTAC  >  NC_002947/877716‑877860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.