New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1005210 =	65 (1.100)	3 (0.060)	3/236	NT	5.1%	coding (140/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005262 =	52 (0.950)					coding (192/2430 nt)	PP_0867	FecA‑like outer membrane receptor

CCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1005360‑1005210 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCA  >  NC_002947/1005262‑1005407                                                                                                                                                                                                                                                                                                            CCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTG                                                                                                                                                      >  4:120385/1‑149   GGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACACGCTGCAGGCTGGTCTGCTGGCCGAGCTGG                                                                                                                                                     <  1:28945/149‑1                                                                                                      CAGCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGC                                                                    >  3:83667/1‑130                                                                                                      CAGCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGC                                                                    <  4:83667/130‑1                                                                                                        GCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGG                                                >  6:261169/1‑148                                                                                                                                               CCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGAC         >  4:222754/1‑149                                                                                                                                                CGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACC        >  5:24931/1‑149                                                                                                                                                   GCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGG     <  5:104642/149‑1                                                                                                                                                       GTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCA  <  3:222369/148‑1                                                                                                                                                                                                                                                                                                            CCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACA‑GCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1005360‑1005210 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCA  >  NC_002947/1005262‑1005407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.