New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1036779 =	58 (0.980)	3 (0.050)	3/242	NT	5.3%	coding (484/591 nt)	PP_0895	hypothetical protein
	?	NC_002947	1036839 =	52 (0.930)					coding (544/591 nt)	PP_0895	hypothetical protein

AGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1036842‑1036779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaaAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG  >  NC_002947/1036839‑1036985                                                                                                                                                                                                                     AGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCA                                                                >  4:215489/1‑149   CTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCAC                                                               >  2:267054/1‑148    TTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGAACGCAGCGATGGGTCGTGCAGGAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCAGCGAGCTGCACG                                                              >  1:223380/1‑148                                                              GAAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCG   >  2:343545/1‑149                                                               AAAGCTCCGACAAGGTGATGTCGTTCTGGCTCAAGGCTCTGCCTGTTTGATCCGCCTGGCAGCCTGCGAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCGTGTGCGCCGAAGCGGTGGAGGCGG  <  6:126994/149‑1                                                               AAAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG  <  3:215489/149‑1                                                                                                                                                                                                                     AGCTTTCCTGCTCGTCCAGGTCGCGCCAGGCGTAGGTGGTACGCAGCGATGGGTCGTGCAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1036842‑1036779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggaaAGCTCCGACAAGCTGATGTCGTTCTGGCTCAAGGCACTGCCGGTATGATCCGCCTGGCAGCCTGCCAGTACGCCATCGAGCTGCACGAAACCTGGGACGCCTACGCCGACCACCTGCAAGGCCTGTGCGCCGAAGCGGTGGAGGCGG  >  NC_002947/1036839‑1036985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.