New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1120665 =	63 (1.070)	3 (0.050)	3/248	NT	5.0%	coding (106/1116 nt)	PP_0982	YjgP/YjgQ family permease
	?	NC_002947	1120698 =	52 (0.910)					coding (139/1116 nt)	PP_0982	YjgP/YjgQ family permease

ATCTCGCTTTCCAGGTACAGGCGCCCGTAAGCCAGGAGGATGCCGAGGAACAGCCCCAGAGGCAGAATCAGTTGCAGGAAGCCTGGCAAGCGGAAGCCCATGATCAGGAACAACACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1120813‑1120665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGTGTTGTTCCTGATCATGGGCTTCCGCTTGCCAGGCTTCCTGCAACTGATTCTGCCTCTGGGGCTGTTCCTCGGCATCCTCCTGGCTTACGGGCGCCTGTACCTGGAAA  >  NC_002947/1120698‑1120806                                                                                                                                                                                                                                                                    ATCTCGCTTTCCAGGTACAGGCGCCCGTAAGCCAGGAGGATGCCGAGGAACAGCCCCAGAGGCAGAATCAGTTGCAGGAAGCCTGGCAAGCGGAAGCCCATGATCAGGAACAACACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGC                                                                                                               <  1:327530/149‑1   CTCGCTTTCCAGGTACAGGCGCCCGTAAGCCAGGTGGATGCCGAGGAACAGCCCCAGAGGCAGAATCAGTTGCAGGAAGCCTGGCAAGCGGAAGCCCATGATCAGGAACAACACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGC                                                                                                               >  4:3023/1‑147                                                                                                              ACAACACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGCGTGTTGTTCCTGATCATGGGCTTCCGCTTGCCAGGCTTCCTGCAACTGATTCTGCCTCTGGGGCTGTTCCTCGGCATCCTCCTGGCTTACGGGCGCCTGTACCTGGA    >  3:76347/1‑147                                                                                                                  CACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGCGTGTTGTTCCTGATCATGGGCTTCCGCTTGCCAGGCTTCCTGCAACTGATTCTGCCTCTGGGGCTGTTCCTCGGCATCCTCCTGGCTTACGGGCGCCTGTACCTGGAAA  >  7:278835/1‑145                                                                                                                  CACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGCGTGTTGTTCCTGATCATGGGCTTCCGCTTGCCAGGCTTCCTGCAACTGATTCTGCCTCTGGGGCTGTTCCTCGGCATCCTCCTGGCTTACGGGCGCCTGTACCTGGAAA  <  8:278835/145‑1                                                                                                                                                                                                                                                                    ATCTCGCTTTCCAGGTACAGGCGCCCGTAAGCCAGGAGGATGCCGAGGAACAGCCCCAGAGGCAGAATCAGTTGCAGGAAGCCTGGCAAGCGGAAGCCCATGATCAGGAACAACACGCCCGGGTCGAGCACGCCCTGGGCAGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1120813‑1120665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGTGTTGTTCCTGATCATGGGCTTCCGCTTGCCAGGCTTCCTGCAACTGATTCTGCCTCTGGGGCTGTTCCTCGGCATCCTCCTGGCTTACGGGCGCCTGTACCTGGAAA  >  NC_002947/1120698‑1120806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.