| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1155724 = | 48 (0.810) | 3 (0.050) | 3/246 | NT | 6.2% | coding (882/1455 nt) | PP_1013 | sensor histidine kinase |
| ? | NC_002947 | 1155749 = | 45 (0.790) | coding (907/1455 nt) | PP_1013 | sensor histidine kinase | |||||
TGTTTTCGTGGATGTCGGTGTCCTTTACGCACTGCAAGGCGCCTTTGACCAGCAACTCCAGCTCGTCCAGGTCCTGGCTGAACTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCAGGCGGGTGATCGGCGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1155872‑1155724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGTAAAGGACACCGACATCCACGAAAACATCGAGCCGGTCGACCTTAACC > NC_002947/1155749‑1155893 TGTTTTCGTGGATGTCGGTGTCCTTTACGCACTGCAAGGCGCCTTTGACCAGCAACTCCAGCTCGTCCAGGTCCTGGCTGAACTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCAGGCGGGTGATCGGCGTGCG > 3:3988/1‑148 GATGTCGGTGTCCTTTACGCACTGCAAGGCGCCTTTGACCAGCAACTCCAGCTCGTCCAGGTCCTGGCTGAAGTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCACGCCGATCACCCGCCTGCGCCTGCGCGTCG < 2:65741/149‑1 CTCCAGCTCGTCCAGGTCCTGGCTGAACTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCAGGCGGGTGATCGGCGT < 5:344090/90‑1 CTCCAGCTCGTCCAGGTCCTGGCTGAACTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCAGGCGGGTGATCGGCGT > 6:344090/1‑90 GCAGGCGCAGGCGGGTGATCGGCGTGCGCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAG > 3:238462/1‑98 GCAGGCGCAGGCGGGTGATCGGCGTGCGCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAG < 4:238462/98‑1 TGCGCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGAAAAGGACACCGACATCCACGAAAACAT > 5:40355/1‑130 TGCGCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGAAAAGGACACCGACATCCACGAAAACAT < 6:40355/130‑1 CGCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGTAAAGGACACCGACATCCACGAAAACATCGAGCCGGGCGACCTTAACC < 6:326063/148‑1 GCCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGTAAAGGACACCGACATCCACGAAAACATCGAGCCG < 6:185754/134‑1 TGTTTTCGTGGATGTCGGTGTCCTTTACGCACTGCAAGGCGCCTTTGACCAGCAACTCCAGCTCGTCCAGGTCCTGGCTGAACTTGGCCTGCAGGCGCTCGTCCTCCAGCAGTTCGACGCGCAGGCGCAGGCGGGTGATCGGCGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1155872‑1155724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcCTGCGCGTCGAACTGCTGGAGGACGAGCGCCTGCAGGCCAAGTTCAGCCAGGACCTGGACGAGCTGGAGTTGCTGGTCAAAGGCGCCTTGCAGTGCGTAAAGGACACCGACATCCACGAAAACATCGAGCCGGTCGACCTTAACC > NC_002947/1155749‑1155893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |