New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1162090 =	62 (1.050)	4 (0.070)	4/248	NT	6.4%	coding (1053/1155 nt)	gtsD	mannose/glucose ABC transporter ATP binding protein
	?	NC_002947	1162142 =	56 (0.980)					coding (1105/1155 nt)	gtsD	mannose/glucose ABC transporter ATP binding protein

CAGTACTGGCCAGGTGCAGGCGCTCGCCATTGGCGGCGTCGAACAGCAGCACCCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1162148‑1162090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGGGATGGAACAGCGCAAACGCATCAAGACACTGGGATCGTTGGCCTTGCTTGCACTT  >  NC_002947/1162142‑1162286                                                                                                                                                                                                              CAGTACTGGCCAGGTGCAGGCGCTCGCCATTCGCGGCGTCGAACAGCAGCACCCGGGCCAGTACTGGCGCAACCGCAAAGGACAAAGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGG                                                         >  6:391124/1‑149       TGGCCAGGTGCAGGCGCTCGCCATTGGCGGCGTCGAACAGCAGCACCCGGGCCAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGGTGACTCGTCTAGACCATCAATAAGAAAAAGAGGACGCAAAGGGATGG                                                    >  5:310188/1‑148         GCCAGGTGCAGGCGCTCGCCATTGGCGGCGTCGAACAGCAGCACCCGGGCCAGTACTGGCGCAACCGCAAAGGATAAC                                                                                                                        <  1:188532/78‑1         GCCAGGTGCAGGCGCTCGCCATTGGCGGCGTCGAACAGCAGCACCCGGGCCAGTACTGGCGCAACCGCAAAGGAAAAC                                                                                                                        >  2:188532/1‑78                                                        GGCCAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGGGATGGAACAGCGCAAACGCATCAAGACACTGGGATCGTTGGCCTTGCTTGCACTT  >  6:301156/1‑149                                                           CAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGGGATGGAACAGCGCAAACGCATCAAGACACTGGGATCGTTGGCCTTGCTTG       <  3:195417/141‑1                                                           CAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGGGATGGAACAGCGCAAACGCATCAAGACACTGGGATCGTTGGCCTTGCTTG       >  4:195417/1‑141                                                                                                                                                                                                              CAGTACTGGCCAGGTGCAGGCGCTCGCCATTGGCGGCGTCGAACAGCAGCACCCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1162148‑1162090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACTGGCGCAACCGCAAAGGACAACGTGGCTCACTTCAAAGGCCGTTGACTCGTCTACACCATCAATAAGAAAAAGAGGACGCAAAGGGATGGAACAGCGCAAACGCATCAAGACACTGGGATCGTTGGCCTTGCTTGCACTT  >  NC_002947/1162142‑1162286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.