| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1267894 | 67 (1.130) | 4 (0.070) | 4/250 | NT | 6.0% | coding (94/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP |
| ? | NC_002947 | = 1267936 | 59 (1.020) | coding (52/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP | |||||
GCACATAGCCCAGGCTGAACAGCGCATCATGGAAGCTGCTGCTTTCGATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1267747‑1267894‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA < NC_002947/1267936‑1267789 GCACATAGCCCAGGCTGAACAGCGCATCATGGAAGCTGCTGCTTTCGATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCC > 7:247291/1‑148GCACATAGCCCAGGCTGAACAGCGCATCATGGAAGCTGCTGCTTTCGATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCC < 8:247291/148‑1 GATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCG > 7:328377/1‑145 GATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCG < 8:328377/145‑1 GCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTAT > 5:95061/1‑91 GCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTAT < 6:95061/91‑1 CCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAA < 1:232843/149‑1 CCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGG < 3:353089/132‑1 CCACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGG > 4:353089/1‑132 CACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA < 7:300411/149‑1 GCACATAGCCCAGGCTGAACAGCGCATCATGGAAGCTGCTGCTTTCGATCAGCGGCGCGCCCATGGCATTGCGCCGTACCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1267747‑1267894‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA < NC_002947/1267936‑1267789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |