| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1294939 = | 57 (0.960) | 4 (0.070) | 4/244 | NT | 7.1% | coding (420/465 nt) | slyB | outer membrane lipoprotein |
| ? | NC_002947 | 1294983 = | 50 (0.890) | coding (464/465 nt) | slyB | outer membrane lipoprotein | |||||
GTCACCGCAATGGCCAGCCGCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1295092‑1294939‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcactGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTGGCCATTGCGGTGACGGC‑GTAGCCGATCACCGCAGCAAAGAACGAACCAGT > NC_002947/1294983‑1295128 GTCACCGCAATGGCCAGCCGCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGC < 6:100109/149‑1 ACCGCAATGGCCAGCCGCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGCTGCGCA > 6:44375/1‑149 CCGCAATGGCCAGCCGCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCAC < 2:3873/149‑1 GCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGC < 3:368989/130‑1 GCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGC > 4:368989/1‑130 GCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACTGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTT < 3:117994/107‑1 GCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACTGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTT > 4:117994/1‑107 TCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACTGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTG < 1:156571/142‑1 TCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACTGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTG > 2:156571/1‑142 aCGCACTTACCGTAGTGCATTAAT‑AAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTGGCCATTGCGGTGACGGC‑GTAGCCGATCACCGCAGCAAAGAACGAAC < 5:282924/147‑1 CACTGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTGGCCATTGCGGTGACGGC‑GTAGCCGATCACCGCAGCAAAGAACGAACCAG > 6:162836/1‑149 CTGACCGTAGTGCAGTAATAAAAAACCCCGTCATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCACCCAAGTCAGGCAATGCTTGTTTTGCGGCTGGCCATTGCGGTGACGGCGGTAGCCGATCACCGCAGCAAATAACGAACCAGT < 1:238557/149‑1 GTCACCGCAATGGCCAGCCGCAAAACCAGCATTGCCTGACTTGGCTGAGGCATGAAAAAACCCCGACTGGCAGCAGCCATGTCGGGGTTTTTTATTACTGCACTACGGTCAGTGCGAAACGCGACTGGTACCGTCTACAGTCATGATGCGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1295092‑1294939‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcactGACCGTAGTGCAGTAATAAAAAACCCCGACATGGCTGCTGCCAGTCGGGGTTTTTTCATGCCTCAGCCAAGTCAGGCAATGCTGGTTTTGCGGCTGGCCATTGCGGTGACGGC‑GTAGCCGATCACCGCAGCAAAGAACGAACCAGT > NC_002947/1294983‑1295128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |