New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1296790 | NA (NA) | 4 (0.070) | 4/242 | NT | NA | intergenic (‑543/‑23) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA/transposase |
? | NC_002947 | = 1296814 | NA (NA) | coding (2/1329 nt) | PP_1133 | transposase |
ACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296636‑1296790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCA < NC_002947/1296814‑1296667 ACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCG > 1:47926/1‑149 cgcgtATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGGGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGC < 4:184648/144‑1 AGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCG > 6:7233/1‑149 AGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCG > 1:288416/1‑149 AGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCG > 8:192761/1‑149 AGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCG > 2:15984/1‑149 AGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCG > 6:128656/1‑149 GAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGC < 7:300112/149‑1 GAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGC < 2:93220/149‑1 GAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGC < 3:186882/149‑1 AGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 7:53991/1‑149 AGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 7:127572/1‑149 AGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 6:275466/1‑149 AGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 5:310688/1‑149 AGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 5:250811/1‑149 AGATCGTAGCCAGCACTGCTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCG > 6:102693/1‑149 GATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGC > 2:72512/1‑149 GATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGC < 2:206913/149‑1 ATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCC > 4:63465/1‑149 GTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGG > 5:189660/1‑146 GTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGG < 6:189660/146‑1 CCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGG < 7:279731/111‑1 CCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGG > 8:279731/1‑111 gaGCGCCATGATGAATCCTCGCAGTATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 8:358102/146‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGG > 2:139658/1‑149 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 3:136510/148‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 6:351405/148‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 6:183836/148‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 8:332975/148‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 5:180034/148‑1 GCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 3:296910/148‑1 GCGCGCCATGATGAAACCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGG < 5:206996/148‑1 CGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGT < 8:237485/149‑1 CGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGT < 2:128046/149‑1 GCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCC‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTG > 8:142234/1‑149 GCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTG > 5:120562/1‑149 CGCCATGATTAATCCTCGCAGTATAAAGGGCGCGCGGGTCACCACCCCCGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTG < 1:316358/149‑1 CGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGTTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGT < 1:139658/149‑1 CGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGT < 8:189034/149‑1 GCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTG < 8:6170/149‑1 GCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTG < 6:371251/149‑1 GCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTG > 6:195442/1‑149 CCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCAGTCTGTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATTCCGTGCGGATCACTCTCCTACGCGGGTGTGC < 1:211306/149‑1 CCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGC < 2:221022/149‑1 CCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTG > 6:122594/1‑148 CATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCA < 6:145093/149‑1 CATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTG > 1:96221/1‑147 ACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296636‑1296790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCA‑CACGGTGGCGAAAGGGTTCACTCTCTCATACGTGGTCACAGCTGAATCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCA < NC_002947/1296814‑1296667 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |