New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1297730	NA (NA)	3 (0.050)	3/242	NT	NA	coding (918/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1297772	NA (NA)					coding (960/1329 nt)	PP_1133	transposase

GCTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1297577‑1297730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgctgTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTTTCG  <  NC_002947/1297772‑1297626                                                                                                                                                                                                                                                                                                                GCTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAG                                                                                                                                                          >  7:130781/1‑149  CTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGGCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         <  7:126199/149‑1  CTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         <  6:303472/149‑1  CTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         <  4:194798/149‑1  CTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAG                                                                                                                                                          <  3:354628/148‑1    GCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAATACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTG                                                                                                                                                        >  1:94396/1‑149    GCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGC                                                                                                                                                       >  3:38867/1‑149     CAAAACACGCCACAGCAATCCAAGTAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCT                                                                                                                                                      <  8:307344/149‑1     CAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCT                                                                                                                                                      >  7:61051/1‑149     CAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCT                                                                                                                                                      >  2:257229/1‑149       AAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           <  6:19114/142‑1       AAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           >  5:19114/1‑142         ACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCT                                                                                                                                                      <  1:243175/145‑1         ACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCT                                                                                                                                                      >  2:243175/1‑145          CAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           >  4:339759/1‑139          CAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           <  3:339759/139‑1           AAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           <  3:18000/138‑1           AAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           >  4:18000/1‑138               CAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           >  3:37544/1‑134               CAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTA                                                                                                                                                           <  4:37544/134‑1                    CCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         <  5:288821/131‑1                    CCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCAAACCATTCGGCTGGACACTGCAATAGT                                                                                                                                                         >  6:288821/1‑131                                                   GAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACATTGTGGAAAGTTCTTGGCGAGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCTGTGAGTACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGC                                                                                                           >  1:50128/1‑146                                                       ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGAGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCTGTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCAC                                                                                                     <  2:50128/149‑1                                                               CAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCTGTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAG                                                                                             <  5:145292/149‑1                                                                                   GACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         <  8:297645/69‑1                                                                                   GACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGT                                                                                                                                                         >  7:297645/1‑69                                                                                                                                                        GCTGTGAGGACGGGAAGCGTGAGAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTT     <  4:235814/148‑1                                                                                                                                                         CTGTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTTTC   >  1:102522/1‑149                                                                                                                                                         CTGTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTTTC   <  3:121476/149‑1                                                                                                                                                          TGTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTTTCG  >  6:251746/1‑149                                                                                                                                                                                                                                                                                                                GCTGCAAAACAAGCCAGAGCCATCCAAGAAGCCTTTACGGAGCCCACACCGAA‑ACGGCGCCCAACAGACTGTATTGCATCAGACTTTGTGGAAAGTTCTTGGCGTGGACCTAACCGCAATTCCAACCATTGGGGTGGACACTGCATTAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1297577‑1297730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgctgTGAGGACGGGAAGCGTGATAGATCTGTACCGATCTCCCCTGCCAGCACTAATGCAGTGTCCACCCCAATGGTTGGAATTGCGGTTAGGTCCACGCCAAGAACTTTCCACAAAGTCTGATGCAATACAGTCTGTTGGGCGCCGTTTCG  <  NC_002947/1297772‑1297626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.