| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1400627 = | 59 (1.000) | 4 (0.070) | 4/242 | NT | 7.0% | coding (597/807 nt) | ybgF | TolQRA transport system periplasmic protein |
| ? | NC_002947 | 1400665 = | 50 (0.890) | coding (635/807 nt) | ybgF | TolQRA transport system periplasmic protein | |||||
GTCACGACCTGCTGAAGGATGCCTTTTACCTTGTCGGTATGGCCCATACGGCGCTCGACATCAGCCAGTTTGTACAGCGAATCTGGCACCTTGCTGTGCTTCGGGTACTTTTGGCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1400779‑1400627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcaGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACT > NC_002947/1400665‑1400809 GTCACGTCCTGCTGAAGGATGCCTTTTACCTTGTCGGTATGGCCCATACGGCGCTCGACATCAGCCAGTTTGTACAGCGAATCTGGCACCTTGCTGTGCTTCGGGTACTTTTGGCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAG < 4:247172/149‑1GTCACGACCTGCTGAAGGATGCCTTTTACCTTGTCGGTATGGCCCATACGGCGCTCGACATCAGCCAGTTTGTACAGCGAATCTGGCACCTTGCTGTGCTTCGGGTACTTTTGGCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAG < 8:308960/149‑1 CGACCTGCTGAAGGATGCCTTTTACCTTGTCGGTATGGCCCATACGGCGCTCGACATCAGCCAGTTTGTACAGCGAATCTGGCACCTTGCTGTGCTTCGGGTACTTTTGGCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCA < 7:134401/149‑1 GCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTCGAGCGCCGTATGGGCCATACCGACAA > 2:45997/1‑125 GCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGGCATCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTAGATGTCGAGCGCCGTATGGGCCATACCGACAA < 1:45997/126‑1 TGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTC > 1:371805/1‑97 TGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTC < 2:371805/97‑1 GTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACT > 3:180527/1‑149 GTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCACGTCGTGACCCCGTACCCCGGCACCTCTGCCGCTCCACT > 5:284153/1‑149 GTCACGACCTGCTGAAGGATGCCTTTTACCTTGTCGGTATGGCCCATACGGCGCTCGACATCAGCCAGTTTGTACAGCGAATCTGGCACCTTGCTGTGCTTCGGGTACTTTTGGCTGACCTGGGCAAAGGCCTGGCTGGCGCCTTGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1400779‑1400627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcaGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCT‑GATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACT > NC_002947/1400665‑1400809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |