New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1410031 = | 65 (1.100) | 4 (0.070) | 4/246 | NT | 6.5% | coding (701/1059 nt) | nadA | quinolinate synthase iron‑sulfur cluster subunit |
? | NC_002947 | 1410076 = | 53 (0.930) | coding (746/1059 nt) | nadA | quinolinate synthase iron‑sulfur cluster subunit |
GGGGCTTCGACGAATTCCTTGTCCGGGCACAACTGCTGCATCTTGTAGAAGATGCCGCGGTCGGTGGCGACGATGAAGGTTTTGTTCGGCAGGGTCTGGGCAGCCTTGATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1410181‑1410031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCG > NC_002947/1410076‑1410218 GGGGCTTCGACGAATTCCTTGTCCGGGCACAACTGCTGCATCTTGTAGAAGATGCCGCGGTCGGTGGCGACGATGAAGGTTTTGTTCGGCAGGGTCTGGGCAGCCTTGATCAGCTGGCTGGTGGAGCCCACCGAGTCGGCCAGCTCGAT > 2:144392/1‑149 GGCTTCGACGACTTCCTTGTCCGGGCACAACTGCTGCATCTTGTAGAAGATGCCGCGGTCGGTGGCGACGATGAAGGTTTTGTTCGGCAGGGTCTGGGCAGCCTTGATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCA < 8:199041/149‑1 CCTTGATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGA < 5:192626/94‑1 CCTTGATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGA > 6:192626/1‑94 ATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCAAGGCTGCCCAGACCCTGCCGAACAATACCTTCATCGTCGCCACCGCCCGCGGCCTCGTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAAGTCGTCGAAGCCCC > 8:347225/1‑149 GCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCT‑GATCAAGGCTGCCCAGACCCTGCCGAACACAACCTTCATCGTCGCCACCGACCGCGGCAGCTTCTACAAGATGCCGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCG > 7:359310/1‑149 GATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCG > 5:229696/1‑148 GATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCG > 8:221594/1‑148 GGGGCTTCGACGAATTCCTTGTCCGGGCACAACTGCTGCATCTTGTAGAAGATGCCGCGGTCGGTGGCGACGATGAAGGTTTTGTTCGGCAGGGTCTGGGCAGCCTTGATCAGCTGGCTGGTGGAGCCCACCGCGTCGGCCAGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1410181‑1410031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCG > NC_002947/1410076‑1410218 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |