New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1602808 =	63 (1.070)	3 (0.050)	3/242	NT	5.2%	coding (655/1215 nt)	PP_5469	SAM‑dependent methyltransferase
	?	NC_002947	1602877 =	50 (0.890)					coding (724/1215 nt)	PP_5469	SAM‑dependent methyltransferase

AAGGCGATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1602962‑1602808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggccGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGA  >  NC_002947/1602877‑1603024                                                                                                                                                                                                                                                                                                                  AAGGCGATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTC                                                                                                                                                            >  8:281143/1‑149  AGGCGATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCG                                                                                                                                                           >  1:322591/1‑149      GATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGGCTCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCG                                                                                                                                                         <  1:274301/148‑1      GATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGCCCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCG                                                                                                                                                         >  2:274301/1‑147      GATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGC                                                                                                                                                       <  7:211785/149‑1                                                                                            CGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCT                                                                 >  5:261374/1‑149                                                                                                             GACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGA                                                                                        >  3:278685/1‑110                                                                                                             GACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGA                                                                                        <  4:278685/110‑1                                                                                                                                                           CCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCG   <  1:334359/149‑1                                                                                                                                                            CGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGA  <  3:194980/149‑1                                                                                                                                                                                                                                                                                                                  AAGGCGATCATCACCTCGATGGCCTCAGGCACCACGCTGCGCACATCACCACACTGGAACTCCAGGCCTGGGTGGTCGAGGCGTGCGGCCGCGGCGTTGCACAGG‑TCGACCATGTCCTGGCGCAGCTCCACGCCGGTGACCTGTGCGTCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1602962‑1602808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggccGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGA  >  NC_002947/1602877‑1603024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.