| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1619440 | 71 (1.200) | 5 (0.090) | 4/246 | NT | 7.1% | coding (795/1290 nt) | opdH | tricarboxylate‑specific outer membrane porin |
| ? | NC_002947 | = 1619474 | 63 (1.110) | coding (761/1290 nt) | opdH | tricarboxylate‑specific outer membrane porin | |||||
ACAACTGCTGCCAGGCGGCGCTGACCTTGTGCCCGCCCAGGGCATAGCTGAGCATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1619310‑1619440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgCCACCCAACCCTGGGGCCCGGGCACCCTGGGTGCCGACCTGCGCCTTGCCATGAGCGACGACGCCGGTGCAGCCAAGGCCGGCAACATCGACAACACCACCGTCAACGGCATGCTCAGCTATGCCCTGGGCGGGCACAAGGTCA < NC_002947/1619474‑1619331 ACAACTGCTGCCAGGCGGCGCTGACCTTGTGCCCGCCCAGGGCATAGCTGAGCATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCGCCACCCAACCCTGGGGCC > 3:206220/1‑149 CGGCGCTGACCTTGTGCCCGCCCAGGGCATAGCTGAGCATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCGCCACCCAACCCTGGGGCCCGGGCACCCTGGGTG < 4:206220/149‑1 GCTGACCTTGTGCCCGCCCAGGGCATAGCTGAGCATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCGCCACCCAACCCTGGGGCCCGGGCACCCTGGGTGCCGA < 8:78263/149‑1 CATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCGCCACCCAACCCTGGGGCCCGGGCACCCTGGGTG > 3:192107/1‑112 CATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCGCCACCCAACCCTGGGGCCCGGGCACCCTGGGTG < 4:192107/112‑1 GTCGCCACCCAACCCTGGGGCCCGGGCACCCTGGGTGCCGACCTGCGCCTTGCCATGAGCGACGACGCCGGTGCAGCCAAGGCCGGCAACATCGACAACACCACCGTCAACGGCATGCTCAGCTATGCCCTGGGCGGGCACAAGGTCA < 6:222767/148‑1 ACAACTGCTGCCAGGCGGCGCTGACCTTGTGCCCGCCCAGGGCATAGCTGAGCATGCCGTTGACGGTGGTGTTGTCGATGTTGCCGGCCTTGGCTGCACCGGCGTCGTCGCTCATGGCAAGGCGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1619310‑1619440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgCCACCCAACCCTGGGGCCCGGGCACCCTGGGTGCCGACCTGCGCCTTGCCATGAGCGACGACGCCGGTGCAGCCAAGGCCGGCAACATCGACAACACCACCGTCAACGGCATGCTCAGCTATGCCCTGGGCGGGCACAAGGTCA < NC_002947/1619474‑1619331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |