New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1647240 = | 71 (1.200) | 6 (0.100) | 5/248 | NT | 7.9% | coding (117/2412 nt) | gcd | quinoprotein glucose dehydrogenase |
? | NC_002947 | 1647279 = | 72 (1.260) | coding (78/2412 nt) | gcd | quinoprotein glucose dehydrogenase |
CTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1647390‑1647240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGC > NC_002947/1647279‑1647425 CTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGG > 5:237943/1‑149 AACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC > 3:76908/1‑149 ACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGG < 8:137042/146‑1 TGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGG > 8:46263/1‑149 CCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAG > 5:317299/1‑120 CCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAG < 6:317299/120‑1 CCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCGTCAGTGCTCATCGTAGGTTCACCGTCAGGTAAAAAAAGGGGT > 7:58151/1‑146 GGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTG < 8:58151/149‑1 AGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAG < 7:46263/149‑1 GCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGC > 5:214163/1‑149 CTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1647390‑1647240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGC > NC_002947/1647279‑1647425 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |