| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1692423 = | 61 (1.030) | 4 (0.070) | 4/242 | NT | 6.1% | coding (520/1623 nt) | PP_1488 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 1692516 = | 65 (1.160) | coding (613/1623 nt) | PP_1488 | methyl‑accepting chemotaxis transducer | |||||
TCGAGGGCATGCACGATACGCTGCATGGGCGCTGTGATAGCGCGCAGCAGCAACAGGCCGCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1692577‑1692423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatcTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTCGACAAGCTGCGTTCCGGTGACCTGAGCATGCGCCTGAGCCTGGATCGCAAGGACGAATTCGGTGCCATCGAAAGCGGCTTCAACG > NC_002947/1692516‑1692660 TCGAGGGCATGCACGATACGCTGCATGGGCGCTGTGATAGCGCGCAGCAGCAACAGGCCGCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGC < 5:95013/149‑1TCGAGGGCATGCACGATACGCTGCATGGGCGCTGTGATAGCGCGCAGCAGCAACAGGCCGCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGC > 7:110395/1‑149 GAGGGCATGCACGATACGCTGCATGGGCGCTGTGATAGCGCGCAGCAGCAACAGGCCGCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCG < 6:340020/148‑1 GCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATCTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCA > 7:296417/1‑149 CGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATCTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTC > 4:31718/1‑148 CAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATCTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTCGACAAGCTGCGTTCCGGTGA < 3:31718/149‑1 TGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATCTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTCGACAAGCTGCGTTCCGGTGACCTGAGCATGCGCCTGAGCCTGGATC < 8:296417/148‑1 CATCTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTCGACAAGCTGCGTTCCGGTGACCTGAGCATGCGCCTGAGCCTGGATCGCAAGGACGAATTCGGTGCCATCGAAAGCGGCTTCAACG < 4:279375/149‑1 TCGAGGGCATGCACGATACGCTGCATGGGCGCTGTGATAGCGCGCAGCAGCAACAGGCCGCAGATGCCGGCAGCGACGATTGCCAGCAGCAGTGAGACCACCATGCTGCCCTTTGCCGTGTTGACTGCGTTGACGATATCGTTGGTGGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1692577‑1692423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatcTGCGGCCTGTTGCTGCTGCGCGCTATCACAGCGCCCATGCAGCGTATCGTGCATGCCCTCGACAAGCTGCGTTCCGGTGACCTGAGCATGCGCCTGAGCCTGGATCGCAAGGACGAATTCGGTGCCATCGAAAGCGGCTTCAACG > NC_002947/1692516‑1692660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |