| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1750260 = | 84 (1.420) | 6 (0.110) | 5/230 | NT | 7.5% | intergenic (‑25/‑64) | PP_1549/PP_1550 | Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator |
| ? | NC_002947 | 1750297 = | 73 (1.370) | intergenic (‑62/‑27) | PP_1549/PP_1550 | Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator | |||||
TCCGCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1750418‑1750260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCA > NC_002947/1750297‑1750436 TCCGCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAA < 7:353369/149‑1 CCGCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAG > 7:122925/1‑149 CCGCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAG > 5:57626/1‑149 GCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAGCA > 1:287915/1‑149 ATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAGCATGCT > 4:351090/1‑149 TTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTT < 4:216117/149‑1 TCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAAC < 1:153459/119‑1 TCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAAC > 2:159185/1‑119 TCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAAC > 2:153459/1‑119 TCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAAC < 1:159185/119‑1 ATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCG > 6:43880/1‑149 ATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTT > 7:90358/1‑95 ATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTT < 8:90358/95‑1 TTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGC > 3:99749/1‑149 GCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAA < 2:228330/84‑1 GCATGCTTGCATATTCAAAACAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAA > 1:228330/1‑84 AAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCG < 3:216117/149‑1 CATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCA < 6:333138/149‑1 CATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCACCAATGGGCGGATGTTCCTGAGCTTCGC > 7:290374/1‑147 TTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGC < 6:301443/123‑1 TTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGCTGACCTATGAGGCCGTCCGCCAATGGGC > 5:301443/1‑123 GAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGC > 2:1407/1‑140 GAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGC < 1:1407/140‑1 TCCGCCCATTGGCGGACGGCCTCATAGGTCACCCCTAGCGCCTTCGCCAGGGCTGAAATAGACCCGAAATGTTGGATTGCCTGGCTCTTGGTCATGGCGACCTCCTCTGCTCGTCCAGGCATTCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1750418‑1750260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCA > NC_002947/1750297‑1750436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |