| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1838334 = | 74 (1.250) | 5 (0.090) | 4/236 | NT | 7.9% | coding (237/414 nt) | PP_1643 | membrane protein |
| ? | NC_002947 | 1838373 = | 49 (0.900) | coding (198/414 nt) | PP_1643 | membrane protein | |||||
ATCGCCCTGCTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838474‑1838334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgcctggCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCATGCCAGGCTCAATGCCCGCGTCAGGCGCAG > NC_002947/1838373‑1838519 ATCGCCCTGCTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTG > 8:299568/1‑140ATCGCCCTGCTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTG < 7:299568/140‑1 CTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCATGCGCCCGGGCGCtgcc < 3:66185/129‑5 CTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCATGCGCCCGGGCGCtgcc > 4:66185/1‑125 gttAACAACCTGTGGTTCGCCAACCTGCATGGGGCCATGTTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATTCTGAAAGGCA‑GCGCCCGGTCGCATGCATGG < 2:162810/123‑1 GTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGG > 1:168600/1‑126 GTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGG > 1:162810/1‑126 CAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCAT > 8:345736/1‑115 CCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCG > 7:186821/1‑139 CCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCG < 8:186821/139‑1 CAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCG > 7:339315/1‑147 CAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTC > 3:341510/1‑123 CAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTC < 4:341510/123‑1 GCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCA > 5:48648/1‑98 GCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCA < 6:48648/98‑1 CCTGGCAACAGCAACAGCAACGGCACCAGCTCGATAGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCATGCCAGGCTCAATGCCCGCGTCAGGC < 8:361807/148‑1 GCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCATGCCAGGCTCAATGCCCGCGTCAGGCGCAG < 3:125466/148‑1 ATCGCCCTGCTGGTGGTGAACAACCTGTGGTTCGCCAACCTGCATGGGGCCAGGGTCGAGGTGATCCTGGCGATCGAGCTGGTGCCGTTGCTGTTGCTGTTGCCAGGCATGCTGAAAGGCA‑GCGCCCGGGCGCATGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838474‑1838334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgcctggCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCATGCCAGGCTCAATGCCCGCGTCAGGCGCAG > NC_002947/1838373‑1838519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |