New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1855432 =	69 (1.170)	3 (0.060)	3/232	NT	5.0%	coding (444/1341 nt)	PP_1659	hypothetical protein
	?	NC_002947	1855485 =	51 (0.950)					coding (497/1341 nt)	PP_1659	hypothetical protein

GCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1855586‑1855432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcaaccagcCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCGGCCTGGA  >  NC_002947/1855485‑1855631                                                                                                                                                                                                                                                                                                                GCGAACCGCAGGCGAAAGCGATGCGGTTGTCGACCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCTCGTGTTAGTGCCGCTTTGGTC                                                                                                                                                            >  1:233393/1‑148   GAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAAC                                                                                                                                                         <  1:181444/149‑1   GAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTG                                                                                                                                                               >  6:82851/1‑143   GAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTG                                                                                                                                                               <  5:82851/143‑1      CCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAG                                                                                                                                                      >  4:224007/1‑149      CCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAG                                                                                                                                                      <  4:37880/149‑1      CCGCAGGCGAAAGCGATGCGGTTGTCGGCATTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAG                                                                                                                                                      <  6:122266/149‑1       CGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTTGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGC                                                                                                                                                     <  3:81013/149‑1       CGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGC                                                                                                                                                     >  7:172497/1‑149                                                                                                        CTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAA                                                                                                >  7:145383/1‑105                                                                                                        CTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAA                                                                                                <  8:145383/105‑1                                                                                                         TGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGT                                                   >  8:216602/1‑149                                                                                                                                                   TCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCG         >  7:200431/1‑149                                                                                                                                                       CCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGCTCATGGTAAAGTCTGCCT     >  4:206600/1‑149                                                                                                                                                       CCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCGGCCT     <  5:122266/149‑1                                                                                                                                                        CAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCGGCCTG    >  7:238005/1‑149                                                                                                                                                          GCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCGGCCTGGA  <  7:12735/149‑1                                                                                                                                                                                                                                                                                                                GCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1855586‑1855432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcaaccagcCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCCTGCGGTTCGCAAAAGACCCAGCAGGTCGGCGCGATCATGGTCAAGTCGGCCTGGA  >  NC_002947/1855485‑1855631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.