| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1890949 = | 79 (1.340) | 5 (0.090) | 5/244 | NT | 6.0% | coding (629/1179 nt) | PP_1696 | membrane protein |
| ? | NC_002947 | 1891003 = | 82 (1.460) | coding (575/1179 nt) | PP_1696 | membrane protein | |||||
TTGAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1891102‑1890949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTTCAGTTCAAGCATGGCCACGCCCAGCAACGGGCCGGCGGCGTAGCCGA > NC_002947/1891003‑1891141 TTGAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTG > 6:102422/1‑149TTGAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTG > 7:25523/1‑149TTGAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGATTCGGCCAAGTGGCGCTGGGGCTG > 7:230335/1‑149 GAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGG < 8:25523/148‑1 GAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTG < 6:24660/147‑1 CAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTT > 8:68258/1‑149 AGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGACGTT > 2:355577/1‑148 GCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTT > 7:116497/1‑147 AGTGGCGCTGGGGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTTCAGTTCAAGCATGGCCACGCCCAGCAACGGGCCGGC < 8:116497/149‑1 GCGCTGGGGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGACGTTCAGTTCAAGCATGGCCACGCCCAGCAACGGGCCGGCGGCG < 1:355577/149‑1 GGCTGGCGCGCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTTCAGTTCAAGCATGGCCACGCCCAGCAACGGGCCGGCGGCGTAGCCGA < 7:68258/149‑1 TTGAACTGAACGACCATGTGCCGTTCCTCGCCTCTGCGCTGCTTGGCCTGGCCATGTGCCTGGCTTATTGGCGCCTGGGTGATCGCAGCCTGCAGGCCAGCGCGCCGGACAAACCTGCGGCCGGCTTCGGCCAAGTGGCGCTGGGGCTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1891102‑1890949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgCTGGCCTGCAGGCTGCGATCACCCAGGCGCCAATAAGCCAGGCACATGGCCAGGCCAAGCAGCGCAGAGGCGAGGAACGGCACATGGTCGTTCAGTTCAAGCATGGCCACGCCCAGCAACGGGCCGGCGGCGTAGCCGA > NC_002947/1891003‑1891141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |