| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2012685 = | 64 (1.080) | 4 (0.070) | 4/248 | NT | 7.0% | coding (1337/2589 nt) | PP_1793 | group 2 family glycosyl transferase |
| ? | NC_002947 | 2012743 = | 45 (0.790) | coding (1279/2589 nt) | PP_1793 | group 2 family glycosyl transferase | |||||
GACCGCTTGCGCAACATCGCTCACAGCAGCGCAGATATCGCCTCTGTCACGCCATTCACAAACAATGGCGAGCTGATGAGTTTCCCACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2012833‑2012685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGCGTGACAGAGGCGATATCTGCGCTGCTGTGAGCGATGTTGCGCAAGCGGTCGAGCCAGTTGCCTTGTACCCGTGTGTCGGCATTCAGCCATACCACATCCCT > NC_002947/2012743‑2012884 GACCGCTTGCGCAACATCGCTCACAGCAGCGCAGATATCGCCTCTGTCACGCCATTCACAAACAATGGCGAGCTGATGAGTTTCCCACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGG < 1:65383/148‑1 CCATTCACAAACAATGGCGAGCTGATGAGTTTCCCACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTG < 5:207673/96‑1 CCATTCACAAACAATGGCGAGCTGATGAGTTTCCCACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTG > 6:207673/1‑96 CACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGCTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGCGTGACAGAGGCGATATCTGCGCTGCTGTGAGCGATGTTGCGC > 3:230228/1‑147 ACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGCTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGC > 7:192872/1‑104 ACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGCTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGC < 8:192872/104‑1 CAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGCTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGCGTGACAGAGGCGATATCTGCGCTGCTGTGAGCGATGTTGCGCAAGCGGTCGAGCCA < 4:230228/148‑1 caTGGCTTTGTTGTAAACTCATCAGCTCGCCATTGTTTGTGAATGGCGTGACAGAGGCGATATCTGCGCTGCTGTGAGCGATGTTGCGCAAGCGGTCGAGCCAGTTGCCTTGTACCCGTGTGTCGGCATTCAGCCATACCACATCCCT < 8:114757/146‑1 GACCGCTTGCGCAACATCGCTCACAGCAGCGCAGATATCGCCTCTGTCACGCCATTCACAAACAATGGCGAGCTGATGAGTTTCCCACAAAGCCAAGTCAGCCATGCCATGCCCAATGCTCGTGAGCAGGCAGCGCTGGATGAACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2012833‑2012685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcTTTGTGGGAAACTCATCAGCTCGCCATTGTTTGTGAATGGCGTGACAGAGGCGATATCTGCGCTGCTGTGAGCGATGTTGCGCAAGCGGTCGAGCCAGTTGCCTTGTACCCGTGTGTCGGCATTCAGCCATACCACATCCCT > NC_002947/2012743‑2012884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |