| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2023590 = | 71 (1.200) | 4 (0.070) | 3/248 | NT | 5.9% | coding (622/897 nt) | rmd | oxidoreductase Rmd |
| ? | NC_002947 | 2023633 = | 59 (1.030) | coding (665/897 nt) | rmd | oxidoreductase Rmd | |||||
CCGGGTTGACCTGCACGTCCAGCTGATGGCCGGTAATGGCGGAACACTTGGCGATAACCTCGCGCAGCGAATGCGTTTGCCCCGAACTGACGTTGACTATCTGGCCCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2023740‑2023590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCATCAGCTGGACGTGCAGGTCAACCCGGCCTTTGTCCGTGCCAACGAGGTCAAGACCTTGTGTGGC > NC_002947/2023633‑2023778 CCGGGTTGACCTGCACGTCCAGCTGATGGCCGGTAATGGCGGAACACTTGGCGATAACCTCGCGCAGCGAATGCGTTTGCCCCGAACTGACGTTGACTATCTGGCCCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACC < 2:198929/149‑1 CCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGCTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCATCAGCTGGACGTGCAGGTCAA > 1:296400/1‑149 CCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGCTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCAT > 3:311038/1‑129 CCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGCTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCAT < 4:311038/129‑1 CAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGCTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCATCAGCTGGACGTGCAGGTCAAC > 1:25127/1‑149 GCTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCATCAGCTGGACGTGCAGGTCAACCCGGCCTTTGTCCGTGCCAACGAGGTCAAGACCTTGTGTGGC > 5:368281/1‑148 CCGGGTTGACCTGCACGTCCAGCTGATGGCCGGTAATGGCGGAACACTTGGCGATAACCTCGCGCAGCGAATGCGTTTGCCCCGAACTGACGTTGACTATCTGGCCCAGCGGGCGTGCCTCGATCAAGCCGCGGTACGCCTGCACGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2023740‑2023590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcTGGGCCAGATAGTCAACGTCAGTTCGGGGCAAACGCATTCGCTGCGCGAGGTTATCGCCAAGTGTTCCGCCATTACCGGCCATCAGCTGGACGTGCAGGTCAACCCGGCCTTTGTCCGTGCCAACGAGGTCAAGACCTTGTGTGGC > NC_002947/2023633‑2023778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |