| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2086250 | NA (NA) | 8 (0.140) | 6/240 | NT | NA | coding (365/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | = 2086296 | NA (NA) | coding (411/1302 nt) | PP_1865 | transposase | |||||
CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086095‑2086250‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < NC_002947/2086296‑2086149 CAAGATCAGTCGAACCTAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 5:237350/149‑1CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 2:252969/1‑149CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 2:366109/149‑1CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 3:300524/149‑1CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 3:292333/149‑1CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTCGTGAC‑AGGCTGCGCGCAGCGCTAGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 5:87375/1‑149 AAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCTCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 5:307049/149‑1 AAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC > 8:57492/1‑149 AAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 7:208988/149‑1 AGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACGAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC > 1:264151/1‑149 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACC < 8:8213/148‑1 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACC > 7:8213/1‑148 ATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCG > 3:221223/1‑148 ATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCG > 5:247871/1‑148 ATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCG > 7:60302/1‑148 AGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 4:106774/149‑1 AGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 4:221223/149‑1 AGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAA > 8:38072/1‑147 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑TGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGGCGATGGCAGCCACTTGGCCTCTA < 7:240306/140‑1 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACC > 8:297355/1‑149 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 8:240306/1‑140 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATCCTTCCTGATTGGCAAGTTCGGGTGGTAGATGGCAGCCACTTGGCCTCTAACGAAAAtc > 8:339221/1‑147 GTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 6:353774/1‑109 GTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 5:353774/109‑1 CGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGAC > 4:253551/1‑149 CGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGAC < 7:297355/149‑1 CTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG < 3:354655/149‑1 GCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGTGTGGTCGATGGCAGCCACTTGGCCTCTAGCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA < 6:87375/149‑1 GCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGG < 7:300935/149‑1 GCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGG < 3:253551/149‑1 CGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA < 4:306880/145‑1 CGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA > 3:306880/1‑145 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAA > 6:145179/1‑149 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAA < 6:19013/149‑1 CCGAAAACCCGGGGCGAGCCGGTCCGCGCTGTTGGCGCTAGGCGCCTAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCGATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCAAACTCATGTATTGTCGGCGCCAAG < 1:189268/149‑1 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAG < 4:171569/149‑1 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATT < 3:138474/137‑1 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCATTTCGGTAGAGGCCAAGTGGCAGCCATCCACCACCCGAA > 6:302461/1‑93 CCGAAAACCCGCGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTATTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATAAGGAAGCATCGCTGAGAAGCCAAACTCATGGATT > 4:138474/1‑137 ctAAAACCCGGGGCCAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAG < 4:188234/119‑1 CGAAAACCCGGGGCGAGCCGCTCCGTGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGC < 3:242093/149‑1 CGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGC < 6:276565/149‑1 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGGCAAGACGCTTTTCGGTAGAGGCCATGGGGCTGCCATCGACCACCCGAAGTTCCCAATCCGGAAGCATGGCTGAGCAGGCCAACTCATGGATTGTCGGCGCCATGCG < 2:238402/149‑1 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG > 6:276593/1‑149 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG > 5:132718/1‑149 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG > 6:144547/1‑149 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG > 6:338995/1‑149 AAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCT < 2:25364/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 7:95974/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 5:318681/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 8:310317/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 2:246007/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCGTTTCGGTAGAGGCCAACTGGCTGCCATCGACCCCCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC > 3:274129/1‑149 CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGAC‑AGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086095‑2086250‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < NC_002947/2086296‑2086149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |